WormBase Tree Display for Gene: WBGene00020104
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| WBGene00020104 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R148.5 | |||||||
| Molecular_name | R148.5a | ||||||||
| R148.5a.1 | |||||||||
| CE31583 | |||||||||
| R148.5b | |||||||||
| CE32711 | |||||||||
| R148.5a.2 | |||||||||
| R148.5b.1 | |||||||||
| Other_name | CELE_R148.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R148.5 | ||||||||
| DB_info | Database | AceView | gene | 3E259 | |||||
| WormQTL | gene | WBGene00020104 | |||||||
| WormFlux | gene | WBGene00020104 | |||||||
| NDB | locus_tag | CELE_R148.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020104|UniProtKB=H2KZA6 | |||||||
| family | PTHR21219 | ||||||||
| NCBI | gene | 175422 | |||||||
| RefSeq | protein | NM_001384050.2 | |||||||
| NM_181961.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF319512 | |||||||
| TrEMBL | UniProtAcc | Q8ITY9 | |||||||
| H2KZA6 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZA6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (120) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; anterior hypodermis; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; and RNA-seq studies. Is affected by fifteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PTB/PI domain and Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R148.5a | |||||||
| R148.5b | |||||||||
| Corresponding_CDS_history | R148.5:wp82 | ||||||||
| Corresponding_transcript | R148.5a.1 | ||||||||
| R148.5a.2 | |||||||||
| R148.5b.1 | |||||||||
| Other_sequence (41) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051969 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006518 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021381 | ||||||||
| Expr1038743 | |||||||||
| Expr1155613 | |||||||||
| Expr2005653 | |||||||||
| Expr2023869 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction (64) | |||||||||
| Map_info | Positive | Positive_clone | R148 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -7.45631 | |||||||
| Method | Gene |
