WormBase Tree Display for Gene: WBGene00019741
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WBGene00019741 | SMap | S_parent | Sequence | M02H5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | nhr-201 | Person_evidence | WBPerson600 | |||||
Sequence_name | M02H5.3 | ||||||||
Molecular_name | M02H5.3 | ||||||||
M02H5.3.1 | |||||||||
CE50748 | |||||||||
M02H5.3.2 | |||||||||
Other_name | M02H5.f | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_M02H5.3 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | nhr-201 | ||||||||
DB_info | Database | AceView | gene | 5A943 | |||||
WormQTL | gene | WBGene00019741 | |||||||
WormFlux | gene | WBGene00019741 | |||||||
NDB | locus_tag | CELE_M02H5.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019741|UniProtKB=Q966H7 | |||||||
family | PTHR45680 | ||||||||
NCBI | gene | 187408 | |||||||
RefSeq | protein | NM_001392466.1 | |||||||
TREEFAM | TREEFAM_ID | TF315604 | |||||||
TrEMBL | UniProtAcc | Q966H7 | |||||||
UniProt_GCRP | UniProtAcc | Q966H7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-201 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele (128) | |||||||||
Strain | WBStrain00036841 | ||||||||
WBStrain00037534 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00090957 | ||||||||
00090958 | |||||||||
00090959 | |||||||||
00090960 | |||||||||
00124515 | |||||||||
00124516 | |||||||||
00124517 | |||||||||
00124518 | |||||||||
Ortholog (71) | |||||||||
Paralog (218) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | M02H5.3 | |||||||
Corresponding_CDS_history | M02H5.3:wp248 | ||||||||
Corresponding_transcript | M02H5.3.1 | ||||||||
M02H5.3.2 | |||||||||
Other_sequence | CSC00143_1 | ||||||||
FD514389.1 | |||||||||
Associated_feature | WBsf646631 | ||||||||
WBsf646632 | |||||||||
WBsf978390 | |||||||||
WBsf231333 | |||||||||
WBsf231334 | |||||||||
Transcription_factor | WBTranscriptionFactor000836 | ||||||||
Experimental_info | RNAi_result | WBRNAi00017142 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050836 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014926 | ||||||||
Expr1038534 | |||||||||
Expr1154530 | |||||||||
Expr2014104 | |||||||||
Expr2032343 | |||||||||
Drives_construct | WBCnstr00025632 | ||||||||
Construct_product | WBCnstr00025632 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (135) | |||||||||
Interaction | WBInteraction000585325 | ||||||||
Map_info | Map | V | Position | -19.992 | |||||
Positive | Positive_clone | M02H5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00062289 | ||||||||
WBPaper00062515 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |