WormBase Tree Display for Gene: WBGene00019006
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| WBGene00019006 | SMap | S_parent | Sequence | F57B10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spg-20 | Paper_evidence | WBPaper00047000 | |||||
| Person_evidence | WBPerson2876 | ||||||||
| Sequence_name | F57B10.9 | ||||||||
| Molecular_name | F57B10.9 | ||||||||
| F57B10.9.1 | |||||||||
| CE30546 | |||||||||
| Other_name | CELE_F57B10.9 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | spg-20 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2016 12:10:59 | WBPerson2970 | Name_change | CGC_name | spg-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spg | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00003325 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00033229 | ||||||||
| 00033230 | |||||||||
| 00033231 | |||||||||
| 00033232 | |||||||||
| 00033233 | |||||||||
| 00123967 | |||||||||
| 00123968 | |||||||||
| Contained_in_operon | CEOP1952 | ||||||||
| CEOP1954 | |||||||||
| CEOP1332 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in cell division and negative regulation of BMP signaling pathway. Predicted to be located in plasma membrane. Expressed in IL2DL; IL2DR; IL2VL; IL2VR; and body wall musculature. Human ortholog(s) of this gene implicated in Troyer syndrome. Is an ortholog of human SPART (spartin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050886 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:18514) | ||||
| Molecular_info | Corresponding_CDS | F57B10.9 | |||||||
| Corresponding_transcript | F57B10.9.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf649245 | ||||||||
| WBsf664345 | |||||||||
| WBsf219605 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048826 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033013 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116493 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062280 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1145 | ||||||||
| Expr6238 | |||||||||
| Expr14456 | |||||||||
| Expr1026640 | |||||||||
| Expr1038207 | |||||||||
| Expr1152581 | |||||||||
| Expr2016052 | |||||||||
| Expr2034287 | |||||||||
| Drives_construct | WBCnstr00003796 | ||||||||
| WBCnstr00026130 | |||||||||
| Construct_product | WBCnstr00026130 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction | WBInteraction000151957 | ||||||||
| WBInteraction000179899 | |||||||||
| WBInteraction000350496 | |||||||||
| WBInteraction000355127 | |||||||||
| WBInteraction000388703 | |||||||||
| WBInteraction000443460 | |||||||||
| WBInteraction000565545 | |||||||||
| WBInteraction000581082 | |||||||||
| WBInteraction000584365 | |||||||||
| Map_info | Map | I | Position | 1.21107 | |||||
| Positive | Positive_clone | F57B10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00047000 | |||||||||
| WBPaper00053550 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063946 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
