WormBase Tree Display for Gene: WBGene00018150
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| WBGene00018150 | SMap | S_parent | Sequence | F37C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | epg-4 | Paper_evidence | WBPaper00036384 | |||||
| Person_evidence | WBPerson716 | ||||||||
| Sequence_name | F37C12.2 | ||||||||
| Molecular_name | F37C12.2 | ||||||||
| F37C12.2.1 | |||||||||
| CE00741 | |||||||||
| F37C12.2.2 | |||||||||
| F37C12.2.3 | |||||||||
| Other_name | eip-24 | ||||||||
| CELE_F37C12.2 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | epg-4 | ||||||||
| DB_info | Database | AceView | gene | 3I275 | |||||
| WormQTL | gene | WBGene00018150 | |||||||
| WormFlux | gene | WBGene00018150 | |||||||
| NDB | locus_tag | CELE_F37C12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018150|UniProtKB=Q20123 | |||||||
| family | PTHR21389 | ||||||||
| NCBI | gene | 176009 | |||||||
| RefSeq | protein | NM_001392138.1 | |||||||
| SwissProt | UniProtAcc | Q20123 | |||||||
| TREEFAM | TREEFAM_ID | TF314441 | |||||||
| UniProt_GCRP | UniProtAcc | Q20123 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 18 Jul 2008 11:30:00 | WBPerson2970 | Name_change | CGC_name | eip-24 | ||||
| 3 | 21 Jun 2010 10:25:58 | WBPerson2970 | Name_change | CGC_name | epg-4 | ||||
| Other_name | eip-24 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | epg | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00067222 | ||||||||
| 00067223 | |||||||||
| 00067224 | |||||||||
| 00067225 | |||||||||
| 00067226 | |||||||||
| 00067227 | |||||||||
| 00067228 | |||||||||
| 00067229 | |||||||||
| 00067230 | |||||||||
| 00067231 | |||||||||
| Contained_in_operon | CEOP3416 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Involved in macroautophagy and negative regulation of autophagosome assembly. Located in endoplasmic reticulum. Expressed in several structures, including body wall musculature; head; hypodermis; pharyngeal muscle cell; and tail. Is an ortholog of human EI24 (EI24 autophagy associated transmembrane protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F37C12.2 | |||||||
| Corresponding_transcript | F37C12.2.1 | ||||||||
| F37C12.2.2 | |||||||||
| F37C12.2.3 | |||||||||
| Other_sequence | CRC04049_1 | ||||||||
| JI170818.1 | |||||||||
| Associated_feature | WBsf645323 | ||||||||
| WBsf225209 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr9074 | ||||||||
| Expr14804 | |||||||||
| Expr1014040 | |||||||||
| Expr1037817 | |||||||||
| Expr1150496 | |||||||||
| Expr2011343 | |||||||||
| Expr2029579 | |||||||||
| Drives_construct | WBCnstr00007050 | ||||||||
| WBCnstr00013703 | |||||||||
| WBCnstr00026744 | |||||||||
| WBCnstr00040924 | |||||||||
| Construct_product | WBCnstr00006907 | ||||||||
| WBCnstr00007050 | |||||||||
| WBCnstr00013703 | |||||||||
| WBCnstr00018686 | |||||||||
| WBCnstr00026744 | |||||||||
| WBCnstr00040924 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | III | Position | -0.775725 | Error | 0.000156 | |||
| Positive | Positive_clone | F37C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036384 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044390 | |||||||||
| WBPaper00052108 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056693 | |||||||||
| WBPaper00061251 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
