WormBase Tree Display for Gene: WBGene00017504
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| WBGene00017504 | SMap | S_parent | Sequence | F16B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F16B4.2 | |||||||
| Molecular_name | F16B4.2a | ||||||||
| F16B4.2a.1 | |||||||||
| CE17012 | |||||||||
| F16B4.2b | |||||||||
| CE36928 | |||||||||
| F16B4.2b.1 | |||||||||
| Other_name | CELE_F16B4.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F16B4.2 | ||||||||
| DB_info | Database | AceView | gene | 5C81 | |||||
| WormQTL | gene | WBGene00017504 | |||||||
| WormFlux | gene | WBGene00017504 | |||||||
| NDB | locus_tag | CELE_F16B4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017504|UniProtKB=Q6EZG9 | |||||||
| family | PTHR31006 | ||||||||
| NCBI | gene | 178649 | |||||||
| RefSeq | protein | NM_001028638.5 | |||||||
| NM_001028639.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF321793 | |||||||
| TrEMBL | UniProtAcc | H2KZS8 | |||||||
| Q6EZG9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q6EZG9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (57) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (35) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in muscle cell; neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including methylmercuric chloride; Rifampin; and Sodium Chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain and F-box protein she-1-like. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16B4.2a | |||||||
| F16B4.2b | |||||||||
| Corresponding_CDS_history | F16B4.2:wp126 | ||||||||
| Corresponding_transcript | F16B4.2a.1 | ||||||||
| F16B4.2b.1 | |||||||||
| Other_sequence | CR01264 | ||||||||
| CRC09054_1 | |||||||||
| Associated_feature | WBsf231429 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044788 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044789 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026997 | ||||||||
| Expr1148753 | |||||||||
| Expr2002648 | |||||||||
| Expr2020865 | |||||||||
| Drives_construct | WBCnstr00027249 | ||||||||
| Construct_product | WBCnstr00027249 | ||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Positive | Positive_clone | F16B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -18.3808 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
