WormBase Tree Display for Gene: WBGene00017438
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| WBGene00017438 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F13H8.5 | |||||||
| Molecular_name | F13H8.5a | ||||||||
| F13H8.5a.1 | |||||||||
| CE41634 | |||||||||
| F13H8.5b | |||||||||
| CE36821 | |||||||||
| F13H8.5b.1 | |||||||||
| Other_name | CELE_F13H8.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F13H8.5 | ||||||||
| DB_info | Database | AceView | gene | 2G544 | |||||
| WormQTL | gene | WBGene00017438 | |||||||
| WormFlux | gene | WBGene00017438 | |||||||
| NDB | locus_tag | CELE_F13H8.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017438|UniProtKB=Q19429 | |||||||
| family | PTHR46705 | ||||||||
| NCBI | gene | 174035 | |||||||
| RefSeq | protein | NM_001267183.3 | |||||||
| NM_001267184.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF315483 | |||||||
| TrEMBL | UniProtAcc | G4S428 | |||||||
| Q19429 | |||||||||
| UniProt_GCRP | UniProtAcc | Q19429 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (50) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | F13H8.5 encodes a protein with a domain of unknown function (DB; IPR002602) that is found in several worm proteins, and a glutamine/asparagine-rich domain. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in ADE sheath cell; germline precursor cell; and hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by twenty-four chemicals including hydrogen sulfide; Ethanol; and 1-methylnicotinamide based on microarray; RNA-seq; and proteomic studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F13H8.5a | |||||||
| F13H8.5b | |||||||||
| Corresponding_CDS_history | F13H8.5:wp125 | ||||||||
| F13H8.5:wp183 | |||||||||
| Corresponding_transcript | F13H8.5a.1 | ||||||||
| F13H8.5b.1 | |||||||||
| Other_sequence (18) | |||||||||
| Associated_feature | WBsf650122 | ||||||||
| WBsf655360 | |||||||||
| WBsf665593 | |||||||||
| WBsf988113 | |||||||||
| WBsf988114 | |||||||||
| WBsf988115 | |||||||||
| WBsf1012351 | |||||||||
| WBsf1012352 | |||||||||
| WBsf1012353 | |||||||||
| WBsf223140 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1028746 | ||||||||
| Expr1037502 | |||||||||
| Expr1148518 | |||||||||
| Expr2002547 | |||||||||
| Expr2020764 | |||||||||
| Drives_construct | WBCnstr00027300 | ||||||||
| Construct_product | WBCnstr00027300 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (241) | |||||||||
| Interaction | WBInteraction000430890 | ||||||||
| WBInteraction000459583 | |||||||||
| Map_info | Positive | Positive_clone | F13H8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.393814 | |||||||
| Method | Gene |
