WormBase Tree Display for Gene: WBGene00017423
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| WBGene00017423 | SMap | S_parent | Sequence | F13C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F13C5.2 | |||||||
| Molecular_name | F13C5.2 | ||||||||
| F13C5.2.1 | |||||||||
| CE19384 | |||||||||
| Other_name | CELE_F13C5.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F13C5.2 | ||||||||
| DB_info | Database | AceView | gene | XB213 | |||||
| WormQTL | gene | WBGene00017423 | |||||||
| WormFlux | gene | WBGene00017423 | |||||||
| NDB | locus_tag | CELE_F13C5.2 | |||||||
| NCBI | gene | 180410 | |||||||
| RefSeq | protein | NM_075723.7 | |||||||
| TREEFAM | TREEFAM_ID | TF317345 | |||||||
| TrEMBL | UniProtAcc | O76561 | |||||||
| UniProt_GCRP | UniProtAcc | O76561 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| Strain | WBStrain00036690 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00038492 | ||||||||
| 00038493 | |||||||||
| 00038494 | |||||||||
| 00038495 | |||||||||
| 00038496 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00022473 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00001470 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00009180 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00010199 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019217 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021636 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | F13C5.2 encodes a bromodomain-containing protein; loss of F13C5.2 activity via RNAi in wild-type or various mutant backgrounds results in embryonic and larval lethality as well as sterility, reduced brood sizes, and uncoordinated locomotion; an F13C5.2::gfp reporter fusion is expressed ubiquitously from early embryogenesis through adulthood with notably stronger expression seen in neurons. | Paper_evidence | WBPaper00024497 | |||||
| WBPaper00029055 | |||||||||
| WBPaper00029258 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 31 Oct 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable lysine-acetylated histone binding activity. Predicted to be involved in chromatin remodeling and regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of chromatin. Expressed widely. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F13C5.2 | |||||||
| Corresponding_transcript | F13C5.2.1 | ||||||||
| Other_sequence (17) | |||||||||
| Associated_feature (15) | |||||||||
| Transcription_factor | WBTranscriptionFactor000985 | ||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr7502 | ||||||||
| Expr1025772 | |||||||||
| Expr1037493 | |||||||||
| Expr1148440 | |||||||||
| Expr2002502 | |||||||||
| Expr2020720 | |||||||||
| Drives_construct | WBCnstr00012647 | ||||||||
| WBCnstr00027311 | |||||||||
| Construct_product | WBCnstr00021815 | ||||||||
| WBCnstr00027311 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (116) | |||||||||
| Map_info | Positive | Positive_clone | F13C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -19.5875 | |||||||
| Reference | WBPaper00027258 | ||||||||
| Method | Gene |
