WormBase Tree Display for Gene: WBGene00016119
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| WBGene00016119 | SMap | S_parent | Sequence | C25H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C25H3.10 | |||||||
| Molecular_name | C25H3.10a | ||||||||
| C25H3.10a.1 | |||||||||
| CE27090 | |||||||||
| C25H3.10b | |||||||||
| CE37612 | |||||||||
| C25H3.10b.1 | |||||||||
| Other_name | CELE_C25H3.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C25H3.10 | ||||||||
| DB_info | Database | AceView | gene | 2F988 | |||||
| WormQTL | gene | WBGene00016119 | |||||||
| WormFlux | gene | WBGene00016119 | |||||||
| NDB | locus_tag | CELE_C25H3.10 | |||||||
| NCBI | gene | 173965 | |||||||
| RefSeq | protein | NM_001026810.5 | |||||||
| NM_001373721.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF320607 | |||||||
| TrEMBL | UniProtAcc | Q5WRT7 | |||||||
| H2KYV2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KYV2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including coelomocyte; germ line; hypodermis; neurons; and ventral nerve cord based on tiling array; proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-four chemicals including Heme; D-glucose; and Cry5B based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: F-box domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25H3.10a | |||||||
| C25H3.10b | |||||||||
| Corresponding_CDS_history | C25H3.10b:wp229 | ||||||||
| Corresponding_transcript | C25H3.10a.1 | ||||||||
| C25H3.10b.1 | |||||||||
| Other_sequence | CR11493 | ||||||||
| FD515558.1 | |||||||||
| CSC00569_1 | |||||||||
| CBC04353_1 | |||||||||
| CRC10417_1 | |||||||||
| CR04968 | |||||||||
| CR11492 | |||||||||
| Associated_feature | WBsf650081 | ||||||||
| WBsf223084 | |||||||||
| WBsf223085 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029208 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011189 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041224 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018991 | ||||||||
| Expr1145260 | |||||||||
| Expr2001107 | |||||||||
| Expr2019328 | |||||||||
| Drives_construct | WBCnstr00028312 | ||||||||
| Construct_product | WBCnstr00028312 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (260) | |||||||||
| Interaction (213) | |||||||||
| Map_info | Positive | Positive_clone | C25H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.967055 | |||||||
| Method | Gene |
