WormBase Tree Display for Gene: WBGene00015868
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| WBGene00015868 | SMap | S_parent | Sequence | C16H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C16H3.3 | |||||||
| Molecular_name | C16H3.3a | ||||||||
| C16H3.3a.1 | |||||||||
| CE27697 | |||||||||
| C16H3.3b | |||||||||
| CE08237 | |||||||||
| C16H3.3b.1 | |||||||||
| Other_name | CELE_C16H3.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C16H3.3 | ||||||||
| DB_info | Database | AceView | gene | XS216 | |||||
| WormQTL | gene | WBGene00015868 | |||||||
| WormFlux | gene | WBGene00015868 | |||||||
| NDB | locus_tag | CELE_C16H3.3 | |||||||
| NCBI | gene | 181787 | |||||||
| RefSeq | protein | NM_001383704.2 | |||||||
| NM_001029238.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF325389 | |||||||
| TrEMBL | UniProtAcc | Q86MD9 | |||||||
| Q94170 | |||||||||
| UniProt_GCRP | UniProtAcc | Q94170 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (113) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (17) | |||||||||
| Paralog | WBGene00018024 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in intestine; neurons; and retrovesicular ganglion based on microarray and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eighteen chemicals including 1-methylnicotinamide; rotenone; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C16H3.3a | |||||||
| C16H3.3b | |||||||||
| Corresponding_transcript | C16H3.3a.1 | ||||||||
| C16H3.3b.1 | |||||||||
| Other_sequence | CR12167 | ||||||||
| FG971686.1 | |||||||||
| AE02427 | |||||||||
| CRC09586_1 | |||||||||
| AE02125 | |||||||||
| Associated_feature | WBsf671534 | ||||||||
| WBsf1008967 | |||||||||
| WBsf1008968 | |||||||||
| WBsf1008969 | |||||||||
| WBsf1008970 | |||||||||
| WBsf1025065 | |||||||||
| WBsf238426 | |||||||||
| WBsf238427 | |||||||||
| WBsf238428 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010877 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040749 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028982 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010878 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015183 | ||||||||
| Expr1036790 | |||||||||
| Expr1144790 | |||||||||
| Expr2000886 | |||||||||
| Expr2019105 | |||||||||
| Drives_construct | WBCnstr00028499 | ||||||||
| Construct_product | WBCnstr00028499 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (184) | |||||||||
| Interaction (37) | |||||||||
| Map_info | Positive | Positive_clone | C16H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 24.5315 | |||||||
| Method | Gene |
