WormBase Tree Display for Gene: WBGene00015633
expand all nodes | collapse all nodes | view schema
| WBGene00015633 | SMap | S_parent | Sequence | C09D4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C09D4.2 | |||||||
| Molecular_name | C09D4.2 | ||||||||
| C09D4.2.1 | |||||||||
| CE08031 | |||||||||
| Other_name | CELE_C09D4.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | C09D4.2 | ||||||||
| DB_info | Database | AceView | gene | 1G59 | |||||
| WormQTL | gene | WBGene00015633 | |||||||
| WormFlux | gene | WBGene00015633 | |||||||
| NDB | locus_tag | CELE_C09D4.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015633|UniProtKB=O01734 | |||||||
| family | PTHR36299 | ||||||||
| NCBI | gene | 182446 | |||||||
| RefSeq | protein | NM_059210.4 | |||||||
| TREEFAM | TREEFAM_ID | TF344249 | |||||||
| TrEMBL | UniProtAcc | O01734 | |||||||
| UniProt_GCRP | UniProtAcc | O01734 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| Strain | WBStrain00037335 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including AVH; HSN; MC neuron; MSpppaaa; and head mesodermal cell based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including rotenone; Cry5B; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF4773 and Domain of unknown function (DUF4773). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C09D4.2 | |||||||
| Corresponding_transcript | C09D4.2.1 | ||||||||
| Other_sequence | CSC01193_1 | ||||||||
| CBC06827_1 | |||||||||
| CBC01069_1 | |||||||||
| CJC05443_1 | |||||||||
| ACC04652_1 | |||||||||
| FD515242.1 | |||||||||
| Acan_isotig05062 | |||||||||
| Associated_feature | WBsf643296 | ||||||||
| WBsf217661 | |||||||||
| WBsf217662 | |||||||||
| WBsf217663 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002920 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040178 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028718 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028689 | ||||||||
| Expr1036690 | |||||||||
| Expr1144251 | |||||||||
| Expr2000642 | |||||||||
| Expr2018866 | |||||||||
| Drives_construct | WBCnstr00028699 | ||||||||
| Construct_product | WBCnstr00028699 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (172) | |||||||||
| Interaction (212) | |||||||||
| Map_info | Positive | Positive_clone | C09D4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.036484 | |||||||
| Reference | WBPaper00041771 | ||||||||
| Method | Gene |
