WormBase Tree Display for Gene: WBGene00013840

WBGene00013840 SMap: S_parent: Sequence: ZC47
  Identity: Version: 2
    Name: CGC_name: fbxa-151 Person_evidence: WBPerson655
      Sequence_name: ZC47.7
      Molecular_name: ZC47.7
        ZC47.7.1
        CE15008
      Other_name: CELE_ZC47.7 Accession_evidence: NDB BX284603
      Public_name: fbxa-151
    DB_info: Database: AceView gene 3C352
        WormQTL gene WBGene00013840
        WormFlux gene WBGene00013840
        NDB locus_tag CELE_ZC47.7
        Panther gene CAEEL|WormBase=WBGene00013840|UniProtKB=G5EDF8
          family PTHR23015
        NCBI gene 191061
        RefSeq protein NM_001384023.2
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc G5EDF8
        UniProt_GCRP UniProtAcc G5EDF8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-151
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (28)
    RNASeq_FPKM (74)
    GO_annotation: 00013998
    Ortholog: WBGene00034189 Caenorhabditis briggsae From_analysis: OMA
      CSP28.g15362 Caenorhabditis panamensis From_analysis: WormBase-Compara
      chrIII_pilon.g6912 Caenorhabditis elegans From_analysis: WormBase-Compara
      chrIII_pilon.g6914 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00065925 Caenorhabditis remanei From_analysis: WormBase-Compara
    Paralog (223)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Involved in innate immune response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZC47.7
    Corresponding_transcript: ZC47.7.1
    Associated_feature: WBsf991265
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1162389
    Drives_construct: WBCnstr00029511
    Construct_product: WBCnstr00029511
    Microarray_results: SMD_ZC47.1
      SMD_ZC47.7
      176212_at
    Expression_cluster (90)
    Interaction (40)
  Map_info: Map: III Position: -22.5736
    Positive: Positive_clone: ZC47 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00041771
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [200225 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5737)
    [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (-22.5752)
  Method: Gene