WormBase Tree Display for Gene: WBGene00012471
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| WBGene00012471 | SMap | S_parent | Sequence | Y17G7B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y17G7B.20 | |||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_Y17G7B.20 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y17G7B.20 | ||||||||
| DB_info | Database | AceView | gene | 2M268 | |||||
| WormQTL | gene | WBGene00012471 | |||||||
| WormFlux | gene | WBGene00012471 | |||||||
| NDB | locus_tag | CELE_Y17G7B.20 | |||||||
| NCBI | gene | 174837 | |||||||
| RefSeq | protein | NM_001129179.3 | |||||||
| NM_001393207.1 | |||||||||
| NM_001393206.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF105008 | |||||||
| TrEMBL | UniProtAcc | A8XJ46 | |||||||
| A8XJ47 | |||||||||
| Q8I4E8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8I4E8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (81) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2582 | ||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalpapaap; AVK; germ line; pharyngeal neurons; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and gld-1 based on microarray and RNA-seq studies. Is affected by five chemicals including Aspirin; Rifampin; and paraquat based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y17G7B.20a | |||||||
| Y17G7B.20b | |||||||||
| Y17G7B.20c | |||||||||
| Corresponding_CDS_history | Y17G7B.20d:wp275 | ||||||||
| Y17G7B.20e:wp275 | |||||||||
| Corresponding_transcript | Y17G7B.20a.1 | ||||||||
| Y17G7B.20a.2 | |||||||||
| Y17G7B.20a.3 | |||||||||
| Y17G7B.20b.1 | |||||||||
| Y17G7B.20c.1 | |||||||||
| Y17G7B.20c.2 | |||||||||
| Y17G7B.20c.3 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf650638 | ||||||||
| WBsf666218 | |||||||||
| WBsf976371 | |||||||||
| WBsf976372 | |||||||||
| WBsf976373 | |||||||||
| WBsf224019 | |||||||||
| WBsf224020 | |||||||||
| WBsf224021 | |||||||||
| WBsf224022 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00107416 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00002080 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015314 | ||||||||
| Expr1035522 | |||||||||
| Expr1159084 | |||||||||
| Expr2007109 | |||||||||
| Expr2025337 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000523808 | ||||||||
| WBInteraction000533257 | |||||||||
| WBInteraction000534335 | |||||||||
| WBInteraction000534536 | |||||||||
| WBInteraction000534581 | |||||||||
| WBInteraction000535087 | |||||||||
| Map_info | Positive | Positive_clone | Y17G7B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 5.45193 | |||||||
| Method | Gene |
