WormBase Tree Display for Gene: WBGene00012007
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| WBGene00012007 | SMap | S_parent | Sequence | T25B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T25B9.1 | |||||||
| Molecular_name | T25B9.1 | ||||||||
| T25B9.1.1 | |||||||||
| CE52909 | |||||||||
| Other_name | CELE_T25B9.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | T25B9.1 | ||||||||
| DB_info | Database | AceView | gene | 4L514 | |||||
| WormQTL | gene | WBGene00012007 | |||||||
| WormFlux | gene | WBGene00012007 | |||||||
| NDB | locus_tag | CELE_T25B9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012007|UniProtKB=Q22768 | |||||||
| family | PTHR13693 | ||||||||
| NCBI | gene | 177968 | |||||||
| RefSeq | protein | NM_069590.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105923 | |||||||
| TrEMBL | UniProtAcc | Q22768 | |||||||
| UniProt_GCRP | UniProtAcc | Q22768 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076357 | ||||||||
| 00076358 | |||||||||
| 00076359 | |||||||||
| 00119196 | |||||||||
| 00119197 | |||||||||
| 00119198 | |||||||||
| 00119199 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00011932 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00016020 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018398 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | T25B9.1 encodes an protein highly similar to 2-amino-3-keto-butyrate coenzyme A ligases (also called AKB ligases or glycine acetyltransferases; EC 2.3.1.29; R.W. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycine C-acetyltransferase activity; pyridoxal phosphate binding activity; and transaminase activity. Predicted to be involved in biosynthetic process and threonine catabolic process. Predicted to be located in mitochondrion. Is an ortholog of human GCAT (glycine C-acetyltransferase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T25B9.1 | |||||||
| Corresponding_CDS_history | T25B9.1:wp109 | ||||||||
| T25B9.1:wp268 | |||||||||
| Corresponding_transcript | T25B9.1.1 | ||||||||
| Other_sequence (61) | |||||||||
| Associated_feature | WBsf652154 | ||||||||
| WBsf230770 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00114482 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00114480 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113713 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054103 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00113709 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035949 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022294 | ||||||||
| Expr1035308 | |||||||||
| Expr1157647 | |||||||||
| Expr2006487 | |||||||||
| Expr2024705 | |||||||||
| Drives_construct | WBCnstr00030206 | ||||||||
| Construct_product | WBCnstr00030206 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (189) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Positive | Positive_clone | T25B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.69179 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
