WormBase Tree Display for Gene: WBGene00011437

WBGene00011437 SMap: S_parent: Sequence: T04F3
  Identity: Version: 2
    Name: CGC_name: smoc-1
      Sequence_name: T04F3.2
      Molecular_name: T04F3.2
        T04F3.2.1
        CE06357
      Other_name: susm-1
        CELE_T04F3.2 Accession_evidence: NDB BX284605
      Public_name: smoc-1
    DB_info: Database: AceView gene 5M239
        WormQTL gene WBGene00011437
        WormFlux gene WBGene00011437
        NDB locus_tag CELE_T04F3.2
        Panther gene CAEEL|WormBase=WBGene00011437|UniProtKB=Q22157
          family PTHR12352
        NCBI gene 179609
        RefSeq protein NM_073563.4
        TrEMBL UniProtAcc Q22157
        UniProt_GCRP UniProtAcc Q22157
        OMIM gene 608488
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 11 Dec 2018 16:50:34 WBPerson1983 Name_change: CGC_name: smoc-1
                Other_name: susm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smoc
    Allele (30)
    RNASeq_FPKM (74)
    GO_annotation: 00118702
    Ortholog (39)
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Expressed in hypodermis; pharyngeal-intestinal valve cell; and pharynx. Human ortholog(s) of this gene implicated in microphthalmia with limb anomalies. Is an ortholog of human SMOC1 (SPARC related modular calcium binding 1) and SMOC2 (SPARC related modular calcium binding 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0060861 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:20318)
  Molecular_info: Corresponding_CDS: T04F3.2
    Corresponding_transcript: T04F3.2.1
    Other_sequence: Dviv_isotig18039
      Acan_isotig12194
      Oden_isotig25710
      Dviv_isotig18040
    Associated_feature: WBsf718410
      WBsf1001435
      WBsf1001436
      WBsf1020499
      WBsf232540
      WBsf232541
  Experimental_info: RNAi_result: WBRNAi00052397 Inferred_automatically: RNAi_primary
      WBRNAi00089144 Inferred_automatically: RNAi_primary
      WBRNAi00018142 Inferred_automatically: RNAi_primary
      WBRNAi00035142 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14587
      Expr1026221
      Expr1035035
      Expr1156020
      Expr2005822
      Expr2024039
    Drives_construct: WBCnstr00030656
      WBCnstr00040362
      WBCnstr00040363
    Construct_product: WBCnstr00030656
      WBCnstr00040362
      WBCnstr00040365
    Microarray_results (20)
    Expression_cluster (111)
    Interaction: WBInteraction000571200
      WBInteraction000571203
      WBInteraction000586815
      WBInteraction000586816
      WBInteraction000586817
      WBInteraction000586818
  Map_info: Map: V Position: 3.32874
    Positive: Positive_clone: T04F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00030887
    WBPaper00038491
    WBPaper00055090
    WBPaper00062831
    WBPaper00066003
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene