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WormBase Tree Display for Gene: WBGene00011072

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Name Class

WBGene00011072SMapS_parentSequenceR06F6
IdentityVersion2
NameCGC_nametag-209Person_evidenceWBPerson201
Sequence_nameR06F6.11
Molecular_nameR06F6.11
R06F6.11.1
CE01617
Other_nameCELE_R06F6.11Accession_evidenceNDBBX284602
Public_nametag-209
DB_infoDatabaseAceViewgene2L77
WormQTLgeneWBGene00011072
WormFluxgeneWBGene00011072
NDBlocus_tagCELE_R06F6.11
NCBIgene174660
RefSeqproteinNM_063920.7
SwissProtUniProtAccQ09418
UniProt_GCRPUniProtAccQ09418
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:52WBPerson1971EventImportedInitial conversion from CDS class of WS125
222 Dec 2004 16:59:41WBPerson2970Name_changeCGC_nametag-209
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtag
Allele (17)
StrainWBStrain00035973
WBStrain00036242
RNASeq_FPKM (74)
Ortholog (17)
Structured_descriptionAutomated_descriptionEnriched in AMshL; AMshR; amphid sheath cell; and intestine based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including D-glucose; bisphenol A; and Cry5B based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSR06F6.11
Corresponding_transcriptR06F6.11.1
Other_sequenceCJC03365_1
Associated_featureWBsf658172
WBsf222062
Experimental_infoRNAi_resultWBRNAi00017490Inferred_automaticallyRNAi_primary
WBRNAi00034666Inferred_automaticallyRNAi_primary
WBRNAi00051394Inferred_automaticallyRNAi_primary
Expr_patternExpr1026762
Expr1155083
Expr2017241
Expr2035377
Drives_constructWBCnstr00030953
Construct_productWBCnstr00030953
Microarray_results (17)
Expression_cluster (146)
Interaction (16)
Map_infoMapIIPosition3.12684Error0.000244
PositivePositive_cloneR06F6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4880
Pseudo_map_position
ReferenceWBPaper00064841
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene