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WormBase Tree Display for Gene: WBGene00010262

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Name Class

WBGene00010262SMapS_parentSequenceF58E10
IdentityVersion2
NameCGC_namedroe-4Person_evidenceWBPerson10050
Sequence_nameF58E10.7
Molecular_nameF58E10.7
F58E10.7.1
CE18789
Other_nameCELE_F58E10.7Accession_evidenceNDBBX284605
Public_namedroe-4
DB_infoDatabaseAceViewgene5O473
WormQTLgeneWBGene00010262
WormFluxgeneWBGene00010262
NDBlocus_tagCELE_F58E10.7
PanthergeneCAEEL|WormBase=WBGene00010262|UniProtKB=Q9XUW9
familyPTHR31712
NCBIgene179895
RefSeqproteinNM_074076.5
TREEFAMTREEFAM_IDTF321463
TrEMBLUniProtAccQ9XUW9
UniProt_GCRPUniProtAccQ9XUW9
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2015 12:07:40WBPerson2970Name_changeCGC_namedroe-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdroe
Allele (17)
RNASeq_FPKM (74)
Ortholog (65)
ParalogWBGene00009087Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018258Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015322Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010404Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015325Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in excretory cell; muscle cell; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; Neurotoxins; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5354 and Family of unknown function (DUF5354).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF58E10.7
Corresponding_transcriptF58E10.7.1
Other_sequenceCRC03521_1
CSC01116_1
CR01831
FD514980.1
CBC12599_1
CBC07400_1
Associated_featureWBsf647505
WBsf232856
Experimental_infoRNAi_resultWBRNAi00033097Inferred_automaticallyRNAi_primary
WBRNAi00033100Inferred_automaticallyRNAi_primary
WBRNAi00049001Inferred_automaticallyRNAi_primary
WBRNAi00049000Inferred_automaticallyRNAi_primary
WBRNAi00015975Inferred_automaticallyRNAi_primary
Expr_patternExpr1028095
Expr1034474
Expr1152739
Expr2011093
Expr2029329
Drives_constructWBCnstr00031546
Construct_productWBCnstr00031546
Microarray_results (18)
Expression_cluster (252)
Interaction (105)
Map_infoMapVPosition5.88432
PositivePositive_cloneF58E10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00044557
WBPaper00064208
WBPaper00065158
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene