WormBase Tree Display for Gene: WBGene00010262
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WBGene00010262 | SMap | S_parent | Sequence | F58E10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | droe-4 | Person_evidence | WBPerson10050 | |||||
Sequence_name | F58E10.7 | ||||||||
Molecular_name | F58E10.7 | ||||||||
F58E10.7.1 | |||||||||
CE18789 | |||||||||
Other_name | CELE_F58E10.7 | Accession_evidence | NDB | BX284605 | |||||
Public_name | droe-4 | ||||||||
DB_info | Database | AceView | gene | 5O473 | |||||
WormQTL | gene | WBGene00010262 | |||||||
WormFlux | gene | WBGene00010262 | |||||||
NDB | locus_tag | CELE_F58E10.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010262|UniProtKB=Q9XUW9 | |||||||
family | PTHR31712 | ||||||||
NCBI | gene | 179895 | |||||||
RefSeq | protein | NM_074076.5 | |||||||
TREEFAM | TREEFAM_ID | TF321463 | |||||||
TrEMBL | UniProtAcc | Q9XUW9 | |||||||
UniProt_GCRP | UniProtAcc | Q9XUW9 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 29 Apr 2015 12:07:40 | WBPerson2970 | Name_change | CGC_name | droe-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | droe | ||||||||
Allele (17) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (65) | |||||||||
Paralog | WBGene00009087 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00018258 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015322 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015325 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Enriched in excretory cell; muscle cell; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by fourteen chemicals including rotenone; Neurotoxins; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF5354 and Family of unknown function (DUF5354). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F58E10.7 | |||||||
Corresponding_transcript | F58E10.7.1 | ||||||||
Other_sequence | CRC03521_1 | ||||||||
CSC01116_1 | |||||||||
CR01831 | |||||||||
FD514980.1 | |||||||||
CBC12599_1 | |||||||||
CBC07400_1 | |||||||||
Associated_feature | WBsf647505 | ||||||||
WBsf232856 | |||||||||
Experimental_info | RNAi_result | WBRNAi00033097 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033100 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049001 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049000 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015975 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028095 | ||||||||
Expr1034474 | |||||||||
Expr1152739 | |||||||||
Expr2011093 | |||||||||
Expr2029329 | |||||||||
Drives_construct | WBCnstr00031546 | ||||||||
Construct_product | WBCnstr00031546 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (252) | |||||||||
Interaction (105) | |||||||||
Map_info | Map | V | Position | 5.88432 | |||||
Positive | Positive_clone | F58E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00044557 | ||||||||
WBPaper00064208 | |||||||||
WBPaper00065158 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |