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WormBase Tree Display for Gene: WBGene00009323

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Name Class

WBGene00009323SMapS_parentSequenceF32B6
IdentityVersion2
NameCGC_namebest-13Person_evidenceWBPerson260
Sequence_nameF32B6.9
Molecular_nameF32B6.9
F32B6.9.1
CE09864
Other_nameCELE_F32B6.9Accession_evidenceNDBBX284604
Public_namebest-13
DB_infoDatabaseAceViewgene4K667
WormQTLgeneWBGene00009323
WormFluxgeneWBGene00009323
NDBlocus_tagCELE_F32B6.9
PanthergeneCAEEL|WormBase=WBGene00009323|UniProtKB=O45435
familyPTHR10736
NCBIgene185198
RefSeqproteinNM_069383.4
SwissProtUniProtAccO45435
UniProt_GCRPUniProtAccO45435
OMIMgene607854
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 Feb 2012 16:30:56WBPerson2970Name_changeCGC_namebest-13
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbest
Allele (15)
StrainWBStrain00003647
RNASeq_FPKM (74)
GO_annotation00034273
00034274
00034275
00034276
00034277
00034278
00034279
00034280
00034281
00116797
Ortholog (46)
Paralog (26)
Structured_descriptionAutomated_descriptionPredicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Expressed in vulB1; vulB2; vulC; vulD; and vulE. Human ortholog(s) of this gene implicated in autosomal dominant vitreoretinochoroidopathy and retinal degeneration (multiple). Is an ortholog of several human genes including BEST1 (bestrophin 1); BEST2 (bestrophin 2); and BEST3 (bestrophin 3).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Disease_infoPotential_modelDOID:0110396Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12703)
DOID:4448Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12703)
DOID:0050661Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12703)
DOID:0050662Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12703)
DOID:0111569Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12703)
Molecular_infoCorresponding_CDSF32B6.9
Corresponding_transcriptF32B6.9.1
Other_sequence (23)
Associated_featureWBsf997500
WBsf997501
WBsf997502
WBsf997503
WBsf997504
WBsf1018019
WBsf228901
Experimental_infoRNAi_resultWBRNAi00031670Inferred_automaticallyRNAi_primary
WBRNAi00014211Inferred_automaticallyRNAi_primary
WBRNAi00046120Inferred_automaticallyRNAi_primary
Expr_patternExpr5932
Expr12306
Expr1010990
Expr1034076
Expr1150003
Expr2009595
Expr2027832
Drives_constructWBCnstr00004087
WBCnstr00032286
Construct_productWBCnstr00032286
Microarray_results (22)
Expression_cluster (121)
InteractionWBInteraction000357675
Map_infoMapIVPosition4.4443
PositivePositive_cloneF32B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00033469
WBPaper00038491
WBPaper00040183
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene