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WormBase Tree Display for Gene: WBGene00008584

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Name Class

WBGene00008584SMapS_parentSequenceF08G5
IdentityVersion2
NameCGC_nameirg-4Person_evidenceWBPerson9709
Sequence_nameF08G5.6
Molecular_nameF08G5.6
F08G5.6.1
CE05576
Other_nameCELE_F08G5.6Accession_evidenceNDBBX284604
Public_nameirg-4
DB_infoDatabaseAceViewgene4N201
WormQTLgeneWBGene00008584
WormFluxgeneWBGene00008584
NDBlocus_tagCELE_F08G5.6
PanthergeneCAEEL|WormBase=WBGene00008584|UniProtKB=Q19223
familyPTHR21447
NCBIgene184206
RefSeqproteinNM_069973.7
TREEFAMTREEFAM_IDTF315647
TrEMBLUniProtAccQ19223
UniProt_GCRPUniProtAccQ19223
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2016 15:57:39WBPerson2970Name_changeCGC_nameirg-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classirg
Allele (84)
RNASeq_FPKM (74)
GO_annotation00063974
00063975
00063976
00063977
00063978
00063979
Ortholog (31)
Paralog (17)
Structured_descriptionConcise_descriptionF08G5.6 encodes a CUB-like domain-containing protein; F08G5.6 is involved in the transcriptional, innate immune response towards several different bacterial pathogens; an F08G5.6::gfp promoter fusion is expressed in the intestine and in head neurons; F08G5.6 expression is positively regulated in the intestine by the ELT-2 GATA transcription factor.Paper_evidenceWBPaper00028482
WBPaper00029438
Curator_confirmedWBPerson1843
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08G5.6
Corresponding_transcriptF08G5.6.1
Associated_featureWBsf034363
WBsf646476
WBsf229294
WBsf229295
Experimental_infoRNAi_resultWBRNAi00012932Inferred_automaticallyRNAi_primary
WBRNAi00044057Inferred_automaticallyRNAi_primary
WBRNAi00095405Inferred_automaticallyRNAi_primary
WBRNAi00065094Inferred_automaticallyRNAi_primary
WBRNAi00095422Inferred_automaticallyRNAi_primary
WBRNAi00030673Inferred_automaticallyRNAi_primary
WBRNAi00095216Inferred_automaticallyRNAi_primary
Expr_patternExpr4725
Expr1018962
Expr1148022
Expr2012819
Expr2031058
Drives_constructWBCnstr00012202
WBCnstr00019358
WBCnstr00032855
Construct_productWBCnstr00012202
WBCnstr00015896
WBCnstr00032855
Microarray_results (17)
Expression_cluster (397)
Interaction (31)
WBProcessWBbiopr:00000039
Map_infoPositivePositive_cloneF08G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV5.92969
Reference (16)
MethodGene