WormBase Tree Display for Gene: WBGene00008366
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| WBGene00008366 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tpra-1 | Person_evidence | WBPerson625 | |||||
| WBPerson567 | |||||||||
| WBPerson2812 | |||||||||
| Sequence_name | D1046.5 | ||||||||
| Molecular_name | D1046.5a | ||||||||
| D1046.5a.1 | |||||||||
| CE32845 | |||||||||
| D1046.5b | |||||||||
| CE44691 | |||||||||
| D1046.5b.1 | |||||||||
| Other_name | CELE_D1046.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | tpra-1 | ||||||||
| DB_info | Database | AceView | gene | 4J731 | |||||
| WormQTL | gene | WBGene00008366 | |||||||
| WormFlux | gene | WBGene00008366 | |||||||
| NDB | locus_tag | CELE_D1046.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008366|UniProtKB=Q18936 | |||||||
| family | PTHR15876 | ||||||||
| NCBI | gene | 259586 | |||||||
| RefSeq | protein | NM_001268429.3 | |||||||
| NM_001268428.2 | |||||||||
| SwissProt | UniProtAcc | Q18936 | |||||||
| TREEFAM | TREEFAM_ID | TF314072 | |||||||
| UniProt_GCRP | UniProtAcc | Q18936 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Dec 2010 14:15:52 | WBPerson2970 | Name_change | CGC_name | tpra-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tpra | ||||||||
| Allele (119) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062870 | ||||||||
| 00062871 | |||||||||
| 00062872 | |||||||||
| 00062873 | |||||||||
| 00062874 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Expressed in head neurons and tail. Is an ortholog of human TPRA1 (transmembrane protein adipocyte associated 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1046.5a | |||||||
| D1046.5b | |||||||||
| Corresponding_CDS_history | D1046.5:wp92 | ||||||||
| Corresponding_transcript | D1046.5a.1 | ||||||||
| D1046.5b.1 | |||||||||
| Other_sequence | HCC07463_1 | ||||||||
| FC554711.1 | |||||||||
| CJC07875_1 | |||||||||
| FC546374.1 | |||||||||
| EX541643.1 | |||||||||
| Oden_isotig18580 | |||||||||
| ACC10637_1 | |||||||||
| EX541432.1 | |||||||||
| HC05642 | |||||||||
| Acan_isotig06072 | |||||||||
| Associated_feature (20) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012523 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043380 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092876 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3889 | ||||||||
| Expr1014131 | |||||||||
| Expr1033625 | |||||||||
| Expr1147365 | |||||||||
| Expr2017469 | |||||||||
| Expr2035608 | |||||||||
| Drives_construct | WBCnstr00011721 | ||||||||
| WBCnstr00018440 | |||||||||
| WBCnstr00033022 | |||||||||
| Construct_product | WBCnstr00033022 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (189) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | IV | Position | 3.99986 | Error | 2.8e-05 | |||
| Positive | Positive_clone | D1046 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041549 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
