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WormBase Tree Display for Gene: WBGene00007919

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Name Class

WBGene00007919SMapS_parentSequenceC34C6
IdentityVersion2
NameCGC_namecup-16Paper_evidenceWBPaper00050677
Person_evidenceWBPerson170
Sequence_nameC34C6.7
Molecular_nameC34C6.7a
C34C6.7a.1
CE43435
C34C6.7b
CE43411
C34C6.7b.1
Other_nameCELE_C34C6.7Accession_evidenceNDBBX284602
Public_namecup-16
DB_infoDatabaseAceViewgene2I997
WormQTLgeneWBGene00007919
WormFluxgeneWBGene00007919
NDBlocus_tagCELE_C34C6.7
NCBIgene174393
RefSeqproteinNM_001267252.2
NM_001267253.3
TrEMBLUniProtAccB7WN89
B7WN88
UniProt_GCRPUniProtAccB7WN88
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
217 Feb 2017 10:41:21WBPerson2970Name_changeCGC_namecup-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcup
Allele (29)
RNASeq_FPKM (74)
GO_annotation00006418
00006419
00006420
00006421
00006422
Ortholog (17)
Structured_descriptionAutomated_descriptionInvolved in endocytosis and lysosomal protein catabolic process. Predicted to be located in lysosome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSC34C6.7a
C34C6.7b
Corresponding_CDS_historyC34C6.7:wp198
Corresponding_transcriptC34C6.7a.1
C34C6.7b.1
Associated_featureWBsf657989
WBsf988799
WBsf221805
Experimental_infoRNAi_resultWBRNAi00041856Inferred_automaticallyRNAi_primary
WBRNAi00011583Inferred_automaticallyRNAi_primary
Expr_patternExpr1022610
Expr1033433
Expr1145874
Expr2010594
Expr2028834
Drives_constructWBCnstr00033382
Construct_productWBCnstr00033382
Microarray_results (16)
Expression_cluster (250)
Interaction (170)
Map_infoMapIIPosition0.85112
PositivePositive_cloneC34C6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00050677
WBPaper00062388
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene