WormBase Tree Display for Gene: WBGene00007694
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| WBGene00007694 | SMap | S_parent | Sequence | C23H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C23H4.6 | |||||||
| Molecular_name | C23H4.6a | ||||||||
| C23H4.6a.1 | |||||||||
| CE08332 | |||||||||
| C23H4.6b | |||||||||
| CE43169 | |||||||||
| C23H4.6b.1 | |||||||||
| Other_name | CELE_C23H4.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C23H4.6 | ||||||||
| DB_info | Database | AceView | gene | XM859 | |||||
| WormQTL | gene | WBGene00007694 | |||||||
| WormFlux | gene | WBGene00007694 | |||||||
| NDB | locus_tag | CELE_C23H4.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007694|UniProtKB=Q93250 | |||||||
| family | PTHR19306 | ||||||||
| NCBI | gene | 181384 | |||||||
| RefSeq | protein | NM_001270260.4 | |||||||
| NM_001270261.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF314520 | |||||||
| TrEMBL | UniProtAcc | Q93250 | |||||||
| B6VQ85 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93250 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (100) | |||||||||
| Strain | WBStrain00002852 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (42) | |||||||||
| Paralog | WBGene00010056 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016151 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable damaged DNA binding activity and single-stranded DNA binding activity. Predicted to be involved in double-strand break repair via homologous recombination. Predicted to be located in nucleus and site of double-strand break. Predicted to be part of Smc5-Smc6 complex. Expressed in tail. Is an ortholog of human SMC6 (structural maintenance of chromosomes 6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C23H4.6a | |||||||
| C23H4.6b | |||||||||
| Corresponding_transcript | C23H4.6a.1 | ||||||||
| C23H4.6b.1 | |||||||||
| Other_sequence | Oden_isotig18804 | ||||||||
| PPC06749_1 | |||||||||
| JO471829.1 | |||||||||
| AS10951 | |||||||||
| JI164970.1 | |||||||||
| ASC02895_1 | |||||||||
| JO469543.1 | |||||||||
| Associated_feature | WBsf648603 | ||||||||
| WBsf648604 | |||||||||
| WBsf1007251 | |||||||||
| WBsf1007252 | |||||||||
| WBsf1024011 | |||||||||
| WBsf1024012 | |||||||||
| WBsf236464 | |||||||||
| WBsf236465 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00070713 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011065 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041032 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070714 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr5318 | ||||||||
| Expr1016067 | |||||||||
| Expr1033325 | |||||||||
| Expr1145069 | |||||||||
| Expr2001021 | |||||||||
| Expr2019239 | |||||||||
| Drives_construct | WBCnstr00003374 | ||||||||
| WBCnstr00033547 | |||||||||
| Construct_product | WBCnstr00033547 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (242) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Positive | Positive_clone | C23H4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 7.01251 | |||||||
| Reference | WBPaper00027033 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
