WormBase Tree Display for Gene: WBGene00006824
expand all nodes | collapse all nodes | view schema
| WBGene00006824 | Evidence | Paper_evidence | WBPaper00019431 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y105E8A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | unc-95 | Person_evidence | WBPerson261 | |||||
| Sequence_name | Y105E8A.6 | ||||||||
| Molecular_name | Y105E8A.6 | ||||||||
| Y105E8A.6.1 | |||||||||
| CE31857 | |||||||||
| Other_name | Y105E8E.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y105E8A.6 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | unc-95 | ||||||||
| DB_info | Database | AceView | gene | 1O974 | |||||
| WormQTL | gene | WBGene00006824 | |||||||
| WormFlux | gene | WBGene00006824 | |||||||
| NDB | locus_tag | CELE_Y105E8A.6 | |||||||
| NCBI | gene | 173301 | |||||||
| RefSeq | protein | NM_170938.7 | |||||||
| SwissProt | UniProtAcc | Q9NEZ5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9NEZ5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| Allele (65) | |||||||||
| Legacy_information | su106sd : very slow or paralysed Egl; abnormal variable muscle birefringence disorganized sarcomeres with collections of thin filaments. ES3. NA4 (su33amber (simialr phenotypes ME0) etc.). | ||||||||
| [C.elegansII] su106sd : very slow or paralysed, Egl; abnormal variable muscle birefringence, disorganized sarcomeres with collections of thin filaments. ES3. OA3: su33amb (similar phenotypes, ME0), etc. [Zengel and Epstein 1980; HE] | |||||||||
| Strain | WBStrain00035931 | ||||||||
| WBStrain00008387 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (20) | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00000438 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00002987 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00002988 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003000 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003167 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006654 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015216 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017644 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022518 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | unc-95 encodes a LIM domain-containing protein related to Drosophila and vertebrate paxillins; UNC-95 is required for locomotion and organization of thick and thin filaments in body wall muscle; by homology, UNC-95 may function as an anchor protein that links signaling and cytoskeletal proteins at focal adhesions; in vitro, UNC-95 interacts with RNF-5, a RING finger protein that may function as an E3 ligase to regulate UNC-95 levels via ubiquitin-mediated degradation; UNC-95 is expressed in body-wall and vulval muscles, and co-localizes with RNF-5 to muscle dense bodies (focal adhesion-like attachment sites). | Paper_evidence | WBPaper00000488 | |||||
| WBPaper00013295 | |||||||||
| WBPaper00019431 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables protein domain specific binding activity. Located in M band; nucleus; and striated muscle dense body. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y105E8A.6 | |||||||
| Corresponding_CDS_history | Y105E8A.6:wp86 | ||||||||
| Corresponding_transcript | Y105E8A.6.1 | ||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf649756 | ||||||||
| WBsf665123 | |||||||||
| WBsf979068 | |||||||||
| WBsf986146 | |||||||||
| WBsf986147 | |||||||||
| WBsf1011238 | |||||||||
| WBsf220605 | |||||||||
| WBsf220606 | |||||||||
| WBsf220607 | |||||||||
| WBsf220608 | |||||||||
| Transcription_factor | WBTranscriptionFactor000438 | ||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr2991 | ||||||||
| Expr2992 | |||||||||
| Expr8314 | |||||||||
| Expr8542 | |||||||||
| Expr1012404 | |||||||||
| Expr1032888 | |||||||||
| Expr1158771 | |||||||||
| Expr2017921 | |||||||||
| Expr2036057 | |||||||||
| Drives_construct | WBCnstr00006034 | ||||||||
| WBCnstr00011070 | |||||||||
| WBCnstr00011071 | |||||||||
| WBCnstr00013356 | |||||||||
| WBCnstr00034135 | |||||||||
| Construct_product | WBCnstr00006034 | ||||||||
| WBCnstr00013356 | |||||||||
| WBCnstr00034135 | |||||||||
| Regulate_expr_cluster | WBPaper00031097:unc-95(su33)_upregulated | ||||||||
| Antibody | WBAntibody00001286 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (157) | |||||||||
| Interaction (56) | |||||||||
| WBProcess | WBbiopr:00000006 | ||||||||
| Map_info | Map | I | Position | 24.674 | Error | 0.00615 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | Y105E8A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 392 | |||||||
| 393 | |||||||||
| 394 | |||||||||
| 3684 | |||||||||
| 3685 | |||||||||
| 7080 | |||||||||
| Multi_point | 2332 | ||||||||
| 4894 | |||||||||
| Pos_neg_data | 5109 | ||||||||
| 5110 | |||||||||
| 5111 | |||||||||
| 5112 | |||||||||
| 5113 | |||||||||
| 5114 | |||||||||
| 5115 | |||||||||
| Reference (31) | |||||||||
| Method | Gene |
