WormBase Tree Display for Gene: WBGene00004827

WBGene00004827 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: K08H2
  Identity: Version: 1
    Name: CGC_name: skr-21 Person_evidence: WBPerson322
      Sequence_name: K08H2.1
      Molecular_name: K08H2.1
        K08H2.1.1
        CE06159
      Other_name: CELE_K08H2.1 Accession_evidence: NDB BX284606
      Public_name: skr-21
    DB_info: Database: AceView gene XN844
        WormQTL gene WBGene00004827
        WormFlux gene WBGene00004827
        NDB locus_tag CELE_K08H2.1
        Panther gene CAEEL|WormBase=WBGene00004827|UniProtKB=Q21367
          family PTHR11165
        NCBI gene 54162166
        RefSeq protein NM_001381130.1
        TREEFAM TREEFAM_ID TF300142
        TrEMBL UniProtAcc Q21367
        UniProt_GCRP UniProtAcc Q21367
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:36 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: skr
    Allele (13)
    RNASeq_FPKM (74)
    GO_annotation: 00071444
      00071445
      00071446
      00071447
      00113233
    Ortholog (22)
    Paralog (20)
    Structured_description: Concise_description: The skr-21 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-21(RNAi) animals are at least superficially normal. Paper_evidence: WBPaper00005128
            WBPaper00005129
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08H2.1
    Corresponding_transcript: K08H2.1.1
    Other_sequence: CRC09334_1
      CBC13717_1
      CGC01386_1
      CR05264
    Associated_feature: WBsf654514
      WBsf654515
      WBsf1007569
      WBsf1024207
      WBsf238111
      WBsf238112
      WBsf238113
      WBsf238114
  Experimental_info: RNAi_result: WBRNAi00086808 Inferred_automatically: RNAi_primary
      WBRNAi00069098 Inferred_automatically: RNAi_primary
      WBRNAi00094811 Inferred_automatically: RNAi_primary
      WBRNAi00086800 Inferred_automatically: RNAi_primary
      WBRNAi00034168 Inferred_automatically: RNAi_primary
      WBRNAi00050351 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1028200
      Expr1032402
      Expr1154054
      Expr2015849
      Expr2034082
    Drives_construct: WBCnstr00035359
    Construct_product: WBCnstr00035359
    Microarray_results (15)
    Expression_cluster (234)
    Interaction (165)
  Map_info: Map: X Position: 10.416
    Positive: Positive_clone: K08H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene