WormBase Tree Display for Gene: WBGene00004173
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| WBGene00004173 | SMap | S_parent | Sequence | ZC15 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-94 | Person_evidence | WBPerson625 | |||||
| Sequence_name | ZC15.8 | ||||||||
| Molecular_name | ZC15.8 | ||||||||
| ZC15.8.1 | |||||||||
| CE16689 | |||||||||
| Other_name | CELE_ZC15.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pqn-94 | ||||||||
| DB_info | Database | AceView | gene | 5U748 | |||||
| WormQTL | gene | WBGene00004173 | |||||||
| WormFlux | gene | WBGene00004173 | |||||||
| NDB | locus_tag | CELE_ZC15.8 | |||||||
| NCBI | gene | 180328 | |||||||
| RefSeq | protein | NM_075510.6 | |||||||
| TrEMBL | UniProtAcc | O18271 | |||||||
| UniProt_GCRP | UniProtAcc | O18271 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in pharyngeal muscle cell and pm7 based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including rotenone; Tunicamycin; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC15.8 | |||||||
| Corresponding_transcript | ZC15.8.1 | ||||||||
| Other_sequence | CBC04716_1 | ||||||||
| CR12113 | |||||||||
| CRC02891_1 | |||||||||
| CJC06183_1 | |||||||||
| CBC08557_1 | |||||||||
| Associated_feature | WBsf653601 | ||||||||
| WBsf1003500 | |||||||||
| WBsf1003501 | |||||||||
| WBsf1003502 | |||||||||
| WBsf1021926 | |||||||||
| WBsf1021927 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058746 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021577 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037956 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020768 | ||||||||
| Expr1032035 | |||||||||
| Expr1162167 | |||||||||
| Expr2015083 | |||||||||
| Expr2033319 | |||||||||
| Drives_construct | WBCnstr00035656 | ||||||||
| Construct_product | WBCnstr00035656 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (210) | |||||||||
| Interaction | WBInteraction000579172 | ||||||||
| Map_info | Map | V | Position | 24.9816 | Error | 0.000505 | |||
| Positive | Positive_clone | ZC15 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00039614 | ||||||||
| WBPaper00043777 | |||||||||
| WBPaper00048136 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
