WormBase Tree Display for Gene: WBGene00004157
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| WBGene00004157 | SMap | S_parent | Sequence | W03D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-75 | Person_evidence | WBPerson625 | |||||
| Sequence_name | W03D2.1 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_W03D2.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pqn-75 | ||||||||
| DB_info | Database | AceView | gene | 4E841 | |||||
| WormQTL | gene | WBGene00004157 | |||||||
| WormFlux | gene | WBGene00004157 | |||||||
| NDB | locus_tag | CELE_W03D2.1 | |||||||
| NCBI | gene | 177165 | |||||||
| RefSeq | protein | NM_001307476.1 | |||||||
| NM_171903.7 | |||||||||
| NM_171312.6 | |||||||||
| NM_171311.7 | |||||||||
| NR_131466.1 | |||||||||
| TREEFAM | TREEFAM_ID | TF350064 | |||||||
| TrEMBL | UniProtAcc | Q8MQG9 | |||||||
| U4PBP8 | |||||||||
| Q8MQG8 | |||||||||
| H2KZ77 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8MQG9 | |||||||
| RNAcentral | URSid | URS00002FF275 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (126) | |||||||||
| Strain | WBStrain00006421 | ||||||||
| WBStrain00006427 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00072893 | Caenorhabditis remanei | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WBGene00040245 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| CSP28.g10836 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g7544 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP32.g16311 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
| CSP39.g201 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| Sp34_40016300 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g10105 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Expressed in pharyngeal gland cell and pharynx. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W03D2.1a | |||||||
| W03D2.1b | |||||||||
| W03D2.1c | |||||||||
| W03D2.1e | |||||||||
| Corresponding_transcript | W03D2.1d | ||||||||
| W03D2.1a.1 | |||||||||
| W03D2.1b.1 | |||||||||
| W03D2.1c.1 | |||||||||
| W03D2.1e.1 | |||||||||
| Other_sequence | BXC01391_1 | ||||||||
| Tcol_isotig02318 | |||||||||
| BXC00779_1 | |||||||||
| CJC08237_1 | |||||||||
| BXC02913_1 | |||||||||
| CRC11321_1 | |||||||||
| Associated_feature (12) | |||||||||
| Transcription_factor | WBTranscriptionFactor001078 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00019548 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054671 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036223 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092047 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054680 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2073 | ||||||||
| Expr13520 | |||||||||
| Expr1027027 | |||||||||
| Expr1032027 | |||||||||
| Expr1158211 | |||||||||
| Expr2015072 | |||||||||
| Expr2033307 | |||||||||
| Construct_product | WBCnstr00016549 | ||||||||
| Microarray_results (32) | |||||||||
| Expression_cluster (215) | |||||||||
| Interaction | WBInteraction000319230 | ||||||||
| WBInteraction000519927 | |||||||||
| WBInteraction000530217 | |||||||||
| WBInteraction000531344 | |||||||||
| Map_info | Map | IV | Position | -0.769722 | Error | 0.03339 | |||
| Positive | Positive_clone | W03D2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036048 | ||||||||
| WBPaper00053071 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
