WormBase Tree Display for Gene: WBGene00003606

WBGene00003606 Evidence: Paper_evidence: WBPaper00003416
  SMap: S_parent: Sequence: F54D1
  Identity: Version: 1
    Name: CGC_name: nhr-7 Person_evidence: WBPerson600
      Sequence_name: F54D1.4
      Molecular_name: F54D1.4a
        F54D1.4a.1
        CE20866
        F54D1.4a.2
        F54D1.4b
      Other_name: CELE_F54D1.4 Accession_evidence: NDB BX284604
      Public_name: nhr-7
    DB_info: Database: AceView gene 4M32
        WormQTL gene WBGene00003606
        WormFlux gene WBGene00003606
        NDB locus_tag CELE_F54D1.4
        Panther gene CAEEL|WormBase=WBGene00003606|UniProtKB=Q20765
          family PTHR24082
        NCBI gene 178035
        RefSeq protein NM_069716.8
            NR_138498.1
        SwissProt UniProtAcc Q20765
        UniProt_GCRP UniProtAcc Q20765
        RNAcentral URSid URS0000A4AB93
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    Allele (73)
    Legacy_information: NMK. Nuclear hormone receptor superfamily.[AE]
      [C.elegansII] NMK. Nuclear hormone receptor superfamily. YAC Y72H7 etc. [AE]
    Strain: WBStrain00036738
      WBStrain00036747
      WBStrain00030118
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog (30)
    Paralog (216)
    Structured_description: Concise_description: nhr-7 encodes one of over 200 C. elegans nuclear receptors; nhr-7 appears to belong to a class of nematode-specific nuclear receptors. Paper_evidence: WBPaper00003416
          Curator_confirmed: WBPerson1843
          Date_last_updated: 12 Aug 2009 00:00:00
      Automated_description: Predicted to enable RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and nuclear receptor activity. Predicted to be involved in cell differentiation; hormone-mediated signaling pathway; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D1.4a
    Corresponding_CDS_history: F54D1.4:wp52
      F54D1.4:wp71
    Corresponding_transcript: F54D1.4b
      F54D1.4a.1
      F54D1.4a.2
    Other_sequence: AF083225
      Oden_isotig25985
      Oden_isotig22591
      BXC05747_1
    Associated_feature: WBsf978488
    Transcription_factor: WBTranscriptionFactor000656
  Experimental_info: RNAi_result: WBRNAi00002401 Inferred_automatically: RNAi_primary
      WBRNAi00107190 Inferred_automatically: RNAi_primary
      WBRNAi00015596 Inferred_automatically: RNAi_primary
      WBRNAi00107533 Inferred_automatically: RNAi_primary
      WBRNAi00107252 Inferred_automatically: RNAi_primary
      WBRNAi00027857 Inferred_automatically: RNAi_primary
      WBRNAi00048281 Inferred_automatically: RNAi_primary
      WBRNAi00092054 Inferred_automatically: RNAi_primary
      WBRNAi00107407 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020255
      Expr1152083
      Expr1200093
      Expr2014231
      Expr2032472
    Drives_construct: WBCnstr00036007
    Construct_product: WBCnstr00036007
    Microarray_results (19)
    Expression_cluster (164)
    Interaction (11)
  Map_info: Map: IV Position: 4.93519 Error: 0.00233
    Positive: Positive_clone: F54D1 Inferred_automatically: From sequence, transcript, pseudogene data
        Y37G7 Person_evidence: WBPerson600
          Author_evidence: Maina CV
        Y51B3 Person_evidence: WBPerson600
          Author_evidence: Maina CV
        Y72H7 Person_evidence: WBPerson600
          Author_evidence: Maina CV
    Pseudo_map_position
  Reference: WBPaper00003416
    WBPaper00027309
  Remark: LG IV
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene