WormBase Tree Display for Gene: WBGene00001976

WBGene00001976 SMap: S_parent: Sequence: T05A7
  Identity: Version: 1
    Name: CGC_name: hmg-11
      Sequence_name: T05A7.4
      Molecular_name: T05A7.4
        T05A7.4.1
        CE04890
      Other_name: hmg-I-alpha Accession_evidence: EMBL AF056578
        CELE_T05A7.4 Accession_evidence: NDB BX284602
      Public_name: hmg-11
    DB_info: Database: AceView gene 2E963
        WormQTL gene WBGene00001976
        SignaLink protein WBGene00001976
        WormFlux gene WBGene00001976
        NDB locus_tag CELE_T05A7.4
        NCBI gene 173805
        RefSeq protein NM_062424.10
        TrEMBL UniProtAcc G5EEL9
        UniProt_GCRP UniProtAcc G5EEL9
        OMIM gene 600698
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hmg
    Allele (11)
    Strain: WBStrain00001708
      WBStrain00031938
    RNASeq_FPKM (74)
    GO_annotation: 00109826
    Ortholog: WBGene00108498 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
      WBGene00067525 Caenorhabditis remanei From_analysis: OMA
      WBGene00154464 Caenorhabditis brenneri From_analysis: OMA
      chrII_pilon.g4289 Caenorhabditis elegans From_analysis: WormBase-Compara
      HGNC:5009 Homo sapiens From_analysis: OMA
            PhylomeDB
    Structured_description: Automated_description: Predicted to enable DNA binding activity. Expressed in head. Human ortholog(s) of this gene implicated in several diseases, including Silver-Russell syndrome; leiomyoma; and ovarian cancer. Is an ortholog of human HMGA2 (high mobility group AT-hook 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:127 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5009)
      DOID:14681 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5009)
      DOID:3315 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5009)
      DOID:2394 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:5009)
  Molecular_info: Corresponding_CDS: T05A7.4
    Corresponding_transcript: T05A7.4.1
    Other_sequence: CRC00496_1
      CR02174
      CRC10991_1
      CBC00660_1
    Associated_feature (14)
    Transcription_factor: WBTranscriptionFactor000399
  Experimental_info: RNAi_result: WBRNAi00035171 Inferred_automatically: RNAi_primary
      WBRNAi00052448 Inferred_automatically: RNAi_primary
      WBRNAi00018185 Inferred_automatically: RNAi_primary
      WBRNAi00090567 Inferred_automatically: RNAi_primary
      WBRNAi00107340 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1768
      Expr6611
      Expr10332
      Expr10333
      Expr1018682
      Expr1031146
      Expr1156070
      Expr1200182
      Expr2012517
      Expr2030756
    Drives_construct: WBCnstr00002532
      WBCnstr00015262
      WBCnstr00036547
    Construct_product: WBCnstr00018593
      WBCnstr00036547
    Microarray_results (21)
    Expression_cluster (276)
    Interaction (98)
  Map_info: Map: II Position: -3.6808 Error: 0.011991
    Positive: Positive_clone: T05A7 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4996
    Pseudo_map_position
  Reference: WBPaper00027309
    WBPaper00035567
    WBPaper00040135
    WBPaper00055090
    WBPaper00064064
    WBPaper00064315
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene