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WormBase Tree Display for Gene: WBGene00001834

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Name Class

WBGene00001834EvidenceCGC_data_submission
SMapS_parentSequenceC53A5
IdentityVersion1
NameCGC_namehda-1Person_evidenceWBPerson419
Sequence_nameC53A5.3
Molecular_nameC53A5.3
C53A5.3.1
CE08952
Other_namegon-10
hdc-1Paper_evidenceWBPaper00050597
RemarkThis is a typo from a 2001 publication that is cited.
CELE_C53A5.3Accession_evidenceNDBBX284605
Public_namehda-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_model (16)
Molecular_infoCorresponding_CDSC53A5.3
Corresponding_transcriptC53A5.3.1
Other_sequence (130)
Associated_featureWBsf647540
WBsf655135
WBsf977348
WBsf977349
WBsf977350
WBsf1002050
WBsf232935
WBsf232936
WBsf232937
Transcription_factorWBTranscriptionFactor001156
Experimental_infoRNAi_result (74)
Expr_patternExpr2918
Expr5576
Expr10987
Expr11136
Expr12648
Expr1014987
Expr1031079
Expr1147026
Expr2012384
Expr2030620
Drives_constructWBCnstr00003241
WBCnstr00006144
WBCnstr00006145
WBCnstr00018008
WBCnstr00036657
Construct_productWBCnstr00036657
Regulate_expr_clusterWBPaper00025192:hda-1(RNAi)_downregulated
WBPaper00025192:hda-1(RNAi)_upregulated
WBPaper00061479:hda-1(ne4747)_upregulated
WBPaper00061479:hda-1(ne4748)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:HDA-1_interacting_protein
AntibodyWBAntibody00000445
WBAntibody00000860
WBAntibody00000922
WBAntibody00002079
Microarray_results (19)
Expression_clusterWBPaper00025192:hda-1(RNAi)_downregulated
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032097:CGH-1-associated-mRNA
WBPaper00033070:Elbe_upregulated
WBPaper00033070:Rhine_upregulated
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038289:oocyte_protein
WBPaper00041072:UTX-1_interacting_protein
WBPaper00043951:insoluble_protein_day16_N2
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00046421:cdc-48.2(tm659)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049498:npr-1(ur89)_regulated_6
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051039:germline_enriched
WBPaper00051245:body-wall-muscle_cytoplasm_expressed
WBPaper00051245:body-wall-muscle_nucleus_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00051245:epidermis_nucleus_expressed
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_nucleus_expressed
WBPaper00051245:nucleus_specific
WBPaper00051245:pharyngeal-muscle_nucleus_expressed
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053615:SMO-1_target
WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_downregulated
WBPaper00055648:germline_expressed
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056826:SGP_biased
WBPaper00058691:CFP-1_interacting_protein
WBPaper00058691:WDR-5.1_interacting_protein
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00059763:neuron_expressed
WBPaper00060084:DVE-1_interacting_protein_cco-1(RNAi)
WBPaper00060084:DVE-1_interacting_protein_control
WBPaper00060459:bcat-1(RNAi)_downregulated
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061340:Parents_of_Y_DA6_DA7_DA9
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:npp-8_4368-E01B7.1_7741
WBPaper00061527:srj-42-srw-113
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062498:PPM-1.D_interacting
WBPaper00062554:MAGU-2_interacting
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064071:NHR-49_interacting
WBPaper00064159:MRG-1_interacting
WBPaper00064201:SNA-3_interacting
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064716:paraquat_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_6_3
cgc4489_group_1
WBPaper00025032:cluster_7
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031832:slr-2_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00035905:FBF-1_Associated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037147:heatshock_upregulated
WBPaper00037611:RNP-8-associated
WBPaper00037695:LD_3-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055435:AuNPs_downregulated
[cgc5767]:cluster_2
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(53_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
[cgc6390]:Cluster_F
[cgc6390]:oogenesis-enriched
Interaction (1258)
Anatomy_functionWBbtf0416
Map_infoMapVPosition6.43888Error0.006431
Well_ordered
PositivePositive_cloneC53A5Person_evidenceWBPerson419
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point7042
Multi_point (4)
Landmark_gene
Reference (105)
Remark (2)
MethodGene