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WormBase Tree Display for Gene: WBGene00001399

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Name Class

WBGene00001399SMapS_parentSequenceF10D2
IdentityVersion1
NameCGC_namefat-7
Sequence_nameF10D2.9
Molecular_nameF10D2.9
F10D2.9.1
CE09320
Other_nameCELE_F10D2.9Accession_evidenceNDBBX284605
Public_namefat-7
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:24WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfat
Allele (42)
StrainWBStrain00004020
WBStrain00004021
WBStrain00004022
WBStrain00008410
WBStrain00008411
RNASeq_FPKM (74)
GO_annotation (21)
Ortholog (59)
ParalogWBGene00001397Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001398Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionfat-7 encodes an essential delta-9 fatty acid desaturase that is required for the synthesis of monounsaturated fatty acids; fat-7 can substitute for the functions of the other two fatty acid desaturases, fat-5 and fat-6; RNA interference has shown that fat-7 is required for viability and normal growth.Paper_evidenceWBPaper00004149
WBPaper00004424
WBPaper00005754
WBPaper00006113
WBPaper00013538
WBPaper00013550
Curator_confirmedWBPerson324
WBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables stearoyl-CoA 9-desaturase activity. Involved in fatty acid biosynthetic process and post-embryonic development. Acts upstream of or within intracellular oxygen homeostasis and response to hypoxia. Predicted to be located in endoplasmic reticulum membrane. Expressed in intestinal cell. Human ortholog(s) of this gene implicated in autosomal dominant nonsyndromic deafness 79. Is an ortholog of human SCD (stearoyl-CoA desaturase) and SCD5 (stearoyl-CoA desaturase 5).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Disease_infoPotential_modelDOID:0112160Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:21088)
Molecular_infoCorresponding_CDSF10D2.9
Corresponding_transcriptF10D2.9.1
Other_sequence (60)
Associated_featureWBsf019173
WBsf019174
WBsf019175
WBsf978978
WBsf233910
WBsf233911
Experimental_infoRNAi_result (54)
Expr_patternChronogram631
Expr4292
Expr4571
Expr5716
Expr13449
Expr16083
Expr1021466
Expr1148206
Expr2011440
Expr2029678
Drives_constructWBCnstr00004076
WBCnstr00009389
WBCnstr00011890
WBCnstr00016671
WBCnstr00020551
WBCnstr00036971
WBCnstr00042754
Construct_productWBCnstr00011890
WBCnstr00016671
WBCnstr00020551
WBCnstr00036971
WBCnstr00038737
Microarray_results (18)
Expression_cluster (352)
Interaction (289)
WBProcessWBbiopr:00000121
Map_infoMapVPosition0.613044Error0.000716
PositivePositive_cloneF10D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4303
4307
Pseudo_map_position
Reference (127)
PictureWBPicture0000013088
WBPicture0000013096
WBPicture0000013098
Remarksequence connection from [Watts J]
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene