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WormBase Tree Display for Gene: WBGene00001065

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Name Class

WBGene00001065SMapS_parentSequenceEGAP7
IdentityVersion1
NameCGC_namedpy-3Person_evidenceWBPerson261
Sequence_nameEGAP7.1
Molecular_nameEGAP7.1
EGAP7.1.1
CE07013
Other_namedpy-12
CELE_EGAP7.1Accession_evidenceNDBBX284606
Public_namedpy-3
DB_infoDatabaseAceViewgeneXC764
WormQTLgeneWBGene00001065
WormFluxgeneWBGene00001065
NDBlocus_tagCELE_EGAP7.1
PanthergeneCAEEL|WormBase=WBGene00001065|UniProtKB=Q19079
familyPTHR24637
NCBIgene180529
RefSeqproteinNM_075994.7
TrEMBLUniProtAccQ19079
UniProt_GCRPUniProtAccQ19079
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:22WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
Reference_alleleWBVar00142921
Allele (27)
Legacy_informatione27 : medium dumpy (non-roller). L1 non-dumpy. ES3 (all stages) ME1. NA > 10 (e2079 sc26 : left roller dumpy m39ts etc.).
e182 : medium dumpy. ES3 (adult). ME1. NA1.
[C.elegansII] e27 : medium dumpy (non-roller). L1 non-dumpy. Suppresses some alleles of glp-1, emb-5.ES3 (all stages) ME1. OA>10 : e2079, sc26 (left roller dumpy), e182 (pka dpy-12, medium dumpy, ES3 (adult), ME1), m39ts [Brenner 1974; EL]
Strain (17)
RNASeq_FPKM (74)
GO_annotation00063404
00063405
00063406
00063407
00063408
00063409
00108189
Ortholog (34)
Paralog (163)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Used to study skin disease. Is an ortholog of human C1QTNF9 (C1q and TNF related 9); C1QTNF9B (C1q and TNF related 9B); and OTOL1 (otolin 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:37Homo sapiensPaper_evidenceWBPaper00061220
Curator_confirmedWBPerson324
Date_last_updated02 May 2022 00:00:00
Models_disease_in_annotationWBDOannot00001174
Molecular_infoCorresponding_CDSEGAP7.1
Corresponding_transcriptEGAP7.1.1
Other_sequence (114)
Associated_feature (13)
Experimental_infoRNAi_result (16)
Expr_patternChronogram1645
Expr1012140
Expr1030674
Expr1147697
Expr2011073
Expr2029310
Drives_constructWBCnstr00037106
Construct_productWBCnstr00037106
Microarray_results (18)
Expression_cluster (278)
Interaction (176)
WBProcessWBbiopr:00000124
Map_infoMapXPosition-17.0217Error0.010146
Well_ordered
PositiveInside_rearrmnDp52
yDp14
yDp16
meDf6
Positive_cloneEGAP7Person_evidenceWBPerson297
Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeOutside_rearrmnDp69
Mapping_data2_point (25)
Multi_point (51)
Pos_neg_data (32)
Landmark_gene
Reference (72)
RemarkSequence connection from [Johnstone IL], [020809 krb]
MethodGene