WormBase Tree Display for Sequence: L1_Nanopore_Roach_82482
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L1_Nanopore_Roach_82482 | DNA | L1_Nanopore_Roach_82482 | 1521 | ||
---|---|---|---|---|---|
DB_info | Database | WormBase | |||
Origin | Life_stage | WBls:0000024 | |||
Species | Caenorhabditis elegans | ||||
Read_coverage | 7 | ||||
Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage L1. From Roach, Sadowski et al. (2019) | |||
Matching_CDS | C53A5.3 | Inferred_automatically | transcript_builder.pl | ||
Matching_transcript | C53A5.3.1 | Inferred_automatically | transcript_builder.pl | ||
Remark | There are 7 entries comprising this consensus structure | ||||
The most 5' extent of this structure has been used as a start. The 3' end is the median of a cluster of (100% : 7 of 7) ends. | |||||
Properties | cDNA | cDNA_EST | |||
EST_5 | |||||
Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_97 | |||
BLAT_Nanopore:OVOC_OM1b_125 | |||||
BLAT_Nanopore:OVOC_OM4_74 | |||||
BLAT_Nanopore:OVOC_OM1a_14 | |||||
BLAT_Nanopore:SRAE_chr2_63 | |||||
BLAT_Nanopore:SRAE_chr1_13 | |||||
BLAT_Nanopore:SRAE_chr1_42 | |||||
Method | Nanopore |