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WormBase Tree Display for CDS: F27C1.8

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Name Class

F27C1.8EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceF27C1
StructureSource_exons1855
DB_infoDatabaseSwissProtUniProtAccP91285
UniProtUniProtAccP91285
UniProt_GCRPUniProtAccP91285
AlphaFoldentryP91285
NCBI_proteinGI_numberGI:373219170
TREEFAMTREEFAM_IDTF316783
Protein_idCHROMOSOME_ICCD662891
DB_remarkDPY-5 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00001067
Corresponding_transcriptF27C1.8.1
Corresponding_proteinCE09720
Corresponding_PCR_productcenix:244-b2
mv_F27C1.8
sjj2_F27C1.8
sjj_F27C1.8
Corresponding_oligo_set (17)
Matching_cDNA (1689)
RNAi_result (25)
Microarray_results (19)
Brief_identificationCuticle collagen dpy-5Accession_evidenceUniProtSP:P91285
RNASeq_FPKM (74)
Methodcurated