WormBase Tree Display for CDS: C53A5.3
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| C53A5.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C53A5 | |||
| Structure | Source_exons (4) | |||||
| DB_info | Database | KEGG | KEGG_id | 3.5.1.98 | ||
| SwissProt | UniProtAcc | O17695 | ||||
| UniProt | UniProtAcc | O17695 | ||||
| AlphaFold | entry | O17695 | ||||
| UniProt_GCRP | UniProtAcc | O17695 | ||||
| NCBI_protein | GI_number | GI:3875199 | ||||
| TREEFAM | TREEFAM_ID | TF106171 | ||||
| Protein_id | CHROMOSOME_V | CAB03984 | 1 | |||
| DB_remark | HDA-1 protein; contains similarity to Pfam domain PF00850 (Histone deacetylase domain); contains similarity to Interpro domains IPR050284 (Histone deacetylase and polyamine deacetylase), IPR023696 (Ureohydrolase domain superfamily), IPR000286 (Histone deacetylase family), IPR003084 (Histone deacetylase), IPR023801 (Histone deacetylase domain), IPR037138 (Histone deacetylase domain superfamily) | |||||
| Origin (2) | ||||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00001834 | ||||
| Corresponding_transcript | C53A5.3.1 | |||||
| Corresponding_protein | CE08952 | |||||
| Corresponding_PCR_product | cenix:10-a2 | |||||
| mv_C53A5.3 | ||||||
| sjj_C53A5.3 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (65) | ||||||
| RNAi_result (74) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | Histone deacetylase 1 | Accession_evidence | UniProt | SP:O17695 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf008469 | |||||
| Method | curated |
