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WormBase Tree Display for CDS: C53A5.3

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Name Class

C53A5.3EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC53A5
StructureSource_exons1174
221338
3841250
13441570
DB_infoDatabaseKEGGKEGG_id3.5.1.98
SwissProtUniProtAccO17695
UniProtUniProtAccO17695
AlphaFoldentryO17695
UniProt_GCRPUniProtAccO17695
NCBI_proteinGI_numberGI:3875199
TREEFAMTREEFAM_IDTF106171
Protein_idCHROMOSOME_VCAB039841
DB_remarkHDA-1 protein; contains similarity to Pfam domain PF00850 (Histone deacetylase domain); contains similarity to Interpro domains IPR050284 (Histone deacetylase and polyamine deacetylase), IPR023696 (Ureohydrolase domain superfamily), IPR000286 (Histone deacetylase family), IPR003084 (Histone deacetylase), IPR023801 (Histone deacetylase domain), IPR037138 (Histone deacetylase domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00001834
Corresponding_transcriptC53A5.3.1
Corresponding_proteinCE08952
Corresponding_PCR_productcenix:10-a2
mv_C53A5.3
sjj_C53A5.3
Corresponding_oligo_set (14)
Matching_cDNA (65)
RNAi_result (74)
Microarray_results (15)
Brief_identificationHistone deacetylase 1Accession_evidenceUniProtSP:O17695
RNASeq_FPKM (74)
Associated_featureWBsf008469
Methodcurated