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WormBase Schema for Model: Sequence

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Class

?SequenceDNAUNIQUE?DNAUNIQUEInt
SMapS_parentUNIQUECanonical_parentUNIQUE?SequenceXREFGenomic_non_canonical
Genomic_parentUNIQUE?SequenceXREFNongenomic
AGP_parentUNIQUE?SequenceXREFAGP_fragment
S_child (15)
Structure (8)
DB_infoDatabase?Database?Database_field?Text
Protein_id?SequenceUNIQUETextUNIQUEInt
Secondary_accession?Text
DB_remark?Text#Evidence
Keyword?Keyword
DB_annotation?DatabaseUNIQUE?LongText
EMBL_dump_info#EMBL_dump_info
Origin (13)
VisibleTitleUNIQUE?Text
Matching_CDS?CDSXREFMatching_cDNA#Evidence
Matching_transcript?TranscriptXREFMatching_cDNA#Evidence
Matching_pseudogene?PseudogeneXREFMatching_cDNA#Evidence
Clone?CloneXREFSequence
Clone_end_seq_read?CloneXREFEnd_sequence
GO_term?GO_termXREFSequence?GO_code#Evidence
Gene?GeneXREFOther_sequence
Paired_read?SequenceXREFPaired_read
Reference?PaperXREFSequence
Expr_pattern?Expr_patternXREFSequence
Interaction?Interaction
RNAi?RNAiXREFSequence
Confidential_remark?Text
Remark?Text#Evidence
PropertiesGenomic_canonicalGene_countUNIQUEInt
Briggsae_canonical
Genomic
ChecksumMD5UNIQUEText
CRC64UNIQUEText
cDNAcDNA_EST
EST_5
EST_3
Capped_5
TSL_tag
EST_consensus
RNAUNIQUEmRNAUNIQUEProcessed_mRNA
Unprocessed_mRNA
tRNATypeUNIQUEText
AnticodonUNIQUEText
rRNAUNIQUEText
snRNAUNIQUEText
snoRNAUNIQUEText
scRNAUNIQUEText
miRNAUNIQUEText
ncRNAUNIQUEText
Ignore#Evidence
Show_in_reverse_orientation
StatusReceivedUNIQUEDateType
Library_constructionUNIQUEDateType
ShotgunUNIQUEDateType
Shotgun_completeUNIQUEDateType
ContiguousUNIQUEDateType
FinishedUNIQUEDateType
SubmittedUNIQUEDateType
AnnotatedUNIQUEDateType
ArchivedUNIQUEDateTypeUNIQUEText
Match_typeUNIQUEMatch_with_function
Match_without_function
Link
SplicesConfirmed_intronIntInt#Splice_confirmation
Predicted_5?MethodIntIntUNIQUEFloat
Predicted_3?MethodIntIntUNIQUEFloat
Cluster_informationContains_reads?SequenceXREFContained_in_cluster
Contained_in_cluster?SequenceXREFContains_reads
Map?MapXREFSequence#Map_position
Interpolated_map_positionUNIQUE?MapUNIQUEFloat
Oligo?OligoXREFIn_sequenceIntUNIQUEInt?Method
Defines_feature?FeatureXREFDefined_by_sequence#Evidence
Assembly_tagsTextIntIntText
HomolDNA_homol?SequenceXREFDNA_homol?MethodFloatIntUNIQUEIntIntUNIQUEInt#Homol_info
Pep_homol?ProteinXREFDNA_homol?MethodFloatIntUNIQUEIntIntUNIQUEInt#Homol_info
Motif_homol?MotifXREFDNA_homol?MethodFloatIntUNIQUEIntIntUNIQUEInt#Homol_info
Homol_homol?Homol_dataXREFDNA_homol?MethodFloatIntUNIQUEIntIntUNIQUEInt#Homol_info
MethodUNIQUE?Method