WormBase Schema for Model: Gene
expand all nodes | collapse all nodes
| ?Gene | Evidence | #Evidence | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | UNIQUE | Sequence | UNIQUE | ?Sequence | XREF | Gene_child | ||
| Identity | Version | UNIQUE | Int | ||||||
| Name (5) | |||||||||
| DB_info | Database | ?Database | ?Database_field | ?Text | |||||
| Species | UNIQUE | ?Species | |||||||
| History | Version_change | Int | UNIQUE | DateType | UNIQUE | ?Person | #Gene_history_action | ||
| Merged_into | UNIQUE | ?Gene | XREF | Acquires_merge | |||||
| Acquires_merge | ?Gene | XREF | Merged_into | ||||||
| Split_from | UNIQUE | ?Gene | XREF | Split_into | |||||
| Split_into | ?Gene | XREF | Split_from | ||||||
| Transposon_in_origin | |||||||||
| Status | UNIQUE | Live | #Evidence | ||||||
| Suppressed | #Evidence | ||||||||
| Dead | #Evidence | ||||||||
| Gene_info | Biotype | UNIQUE | ?SO_term | ||||||
| Gene_class | UNIQUE | ?Gene_class | XREF | Genes | |||||
| Laboratory | ?Laboratory | ||||||||
| Cloned_by | #Evidence | ||||||||
| Reference_allele | ?Variation | #Evidence | |||||||
| Allele | ?Variation | XREF | Gene | #Evidence | |||||
| Possibly_affected_by | ?Variation | XREF | Possibly_affects | #Evidence | |||||
| Legacy_information | Text | #Evidence | |||||||
| Complementation_data | Text | ||||||||
| Strain | ?Strain | XREF | Gene | ||||||
| Component_of_genotype | ?Genotype | XREF | Gene | ||||||
| In_cluster | ?Gene_cluster | XREF | Contains_gene | ||||||
| RNASeq_FPKM | ?Life_stage | Float | #Evidence | ||||||
| GO_term | ?GO_term | XREF | Gene | ?GO_code | #Evidence | ||||
| GO_annotation | ?GO_annotation | XREF | Gene | ||||||
| Contained_in_operon | ?Operon | XREF | Contains_gene | ||||||
| Ortholog | ?Gene | XREF | Ortholog | ?Species | #Evidence | ||||
| Paralog | ?Gene | XREF | Paralog | ?Species | #Evidence | ||||
| Structured_description (11) | |||||||||
| Disease_info | Experimental_model | ?DO_term | XREF | Gene_by_biology | ?Species | #Evidence | |||
| Potential_model | ?DO_term | XREF | Gene_by_orthology | ?Species | #Evidence | ||||
| Disease_relevance | ?Text | ?Species | #Evidence | ||||||
| Modifies_disease | ?DO_term | XREF | Disease_modifier_gene | ||||||
| Models_disease_in_annotation | ?Disease_model_annotation | XREF | Disease_relevant_gene | ||||||
| Modifies_disease_in_annotation | ?Disease_model_annotation | XREF | Modifier_gene | ||||||
| Molecular_info (12) | |||||||||
| Experimental_info (14) | |||||||||
| Map_info | Map | UNIQUE | ?Map | XREF | Gene | #Map_position | |||
| Well_ordered | |||||||||
| Hide_under | ?Gene | XREF | Representative_for | ||||||
| Representative_for | ?Gene | XREF | Hide_under | ||||||
| Positive (2) | |||||||||
| Negative | Outside_rearr | ?Rearrangement | XREF | Gene_outside | #Evidence | ||||
| Negative_clone | ?Clone | XREF | Negative_gene | #Evidence | |||||
| Mapping_data | 2_point | ?2_point_data | |||||||
| Multi_point | ?Multi_pt_data | ||||||||
| Pos_neg_data | ?Pos_neg_data | ||||||||
| Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | |||||
| Landmark_gene | |||||||||
| Pseudo_map_position | |||||||||
| Reference | ?Paper | XREF | Gene | #Evidence | |||||
| Picture | ?Picture | XREF | Gene | ||||||
| Remark | ?Text | #Evidence | |||||||
| Method | UNIQUE | ?Method |
