WormBase Schema for Model: Gene
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| ?Gene | Evidence | #Evidence | ||||||
|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | UNIQUE | Sequence | UNIQUE | ?Sequence | XREF | Gene_child | |
| Identity (6) | ||||||||
| Gene_info | Biotype | UNIQUE | ?SO_term | |||||
| Gene_class | UNIQUE | ?Gene_class | XREF | Genes | ||||
| Laboratory | ?Laboratory | |||||||
| Cloned_by | #Evidence | |||||||
| Reference_allele | ?Variation | #Evidence | ||||||
| Allele | ?Variation | XREF | Gene | #Evidence | ||||
| Possibly_affected_by | ?Variation | XREF | Possibly_affects | #Evidence | ||||
| Legacy_information | Text | #Evidence | ||||||
| Complementation_data | Text | |||||||
| Strain | ?Strain | XREF | Gene | |||||
| Component_of_genotype | ?Genotype | XREF | Gene | |||||
| In_cluster | ?Gene_cluster | XREF | Contains_gene | |||||
| RNASeq_FPKM | ?Life_stage | Float | #Evidence | |||||
| GO_term | ?GO_term | XREF | Gene | ?GO_code | #Evidence | |||
| GO_annotation | ?GO_annotation | XREF | Gene | |||||
| Contained_in_operon | ?Operon | XREF | Contains_gene | |||||
| Ortholog | ?Gene | XREF | Ortholog | ?Species | #Evidence | |||
| Paralog | ?Gene | XREF | Paralog | ?Species | #Evidence | |||
| Structured_description (11) | ||||||||
| Disease_info | Experimental_model | ?DO_term | XREF | Gene_by_biology | ?Species | #Evidence | ||
| Potential_model | ?DO_term | XREF | Gene_by_orthology | ?Species | #Evidence | |||
| Disease_relevance | ?Text | ?Species | #Evidence | |||||
| Modifies_disease | ?DO_term | XREF | Disease_modifier_gene | |||||
| Models_disease_in_annotation | ?Disease_model_annotation | XREF | Disease_relevant_gene | |||||
| Modifies_disease_in_annotation | ?Disease_model_annotation | XREF | Modifier_gene | |||||
| Molecular_info (12) | ||||||||
| Experimental_info (14) | ||||||||
| Map_info | Map | UNIQUE | ?Map | XREF | Gene | #Map_position | ||
| Well_ordered | ||||||||
| Hide_under | ?Gene | XREF | Representative_for | |||||
| Representative_for | ?Gene | XREF | Hide_under | |||||
| Positive | Inside_rearr | ?Rearrangement | XREF | Gene_inside | #Evidence | |||
| Positive_clone | ?Clone | XREF | Positive_gene | #Evidence | ||||
| Negative (2) | ||||||||
| Mapping_data | 2_point | ?2_point_data | ||||||
| Multi_point | ?Multi_pt_data | |||||||
| Pos_neg_data | ?Pos_neg_data | |||||||
| Interpolated_map_position | UNIQUE | ?Map | UNIQUE | Float | ||||
| Landmark_gene | ||||||||
| Pseudo_map_position | ||||||||
| Reference | ?Paper | XREF | Gene | #Evidence | ||||
| Picture | ?Picture | XREF | Gene | |||||
| Remark | ?Text | #Evidence | ||||||
| Method | UNIQUE | ?Method |
