WormBase Tree Display for Variation: WBVar01754733
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WBVar01754733 | Name | Public_name | WBVar01754733 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00454316 | |||||||
F53H2.1a.1:c.2550+4A>T | ||||||||
F53H2.1c.1:c.795+4A>T | ||||||||
F53H2.1b.1:c.2016+4A>T | ||||||||
HGVSg | CHROMOSOME_V:g.20393060A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F53H2 | ||||
Flanking_sequences | GATGTAATGTTCAATAAAGTGTTAAAGGTA | TATATAAATTTGGCCAAGAGCATTTCAATT | ||||||
Mapping_target | F53H2 | |||||||
Source_location | 225 | CHROMOSOME_V | 20393029 | 20393029 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (4) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010004 | ||||||
Transcript | F53H2.1a.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F53H2.1a.1:c.2550+4A>T | |||||||
Intron_number | 21/21 | |||||||
F53H2.1c.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F53H2.1c.1:c.795+4A>T | |||||||
Intron_number | 5/5 | |||||||
F53H2.1b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F53H2.1b.1:c.2016+4A>T | |||||||
Intron_number | 16/16 | |||||||
Method | WGS_Flibotte |