WormBase Tree Display for Variation: WBVar00047540
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WBVar00047540 | Name | Public_name | WBVar00047540 | |||
---|---|---|---|---|---|---|
Other_name | haw90606 | |||||
cewivar00256948 | ||||||
F47H4.11.1:c.103C>G | ||||||
CE50217:p.Gln35Glu | ||||||
HGVSg | CHROMOSOME_V:g.17351604G>C | |||||
Sequence_details | SMap | S_parent | Sequence | F47H4 | ||
Flanking_sequences | tagaaggaaattttaatttcatttt | ttctattttaatgagtagagataca | ||||
Mapping_target | F47H4 | |||||
Type_of_mutation | Substitution | G | C | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (11) | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | ||||||
Status | Live | |||||
Affects | Gene | WBGene00009841 | ||||
Transcript | F47H4.11.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated_low_confidence | ||||
PolyPhen | 0.001 | benign | ||||
HGVSc | F47H4.11.1:c.103C>G | |||||
HGVSp | CE50217:p.Gln35Glu | |||||
cDNA_position | 103 | |||||
CDS_position | 103 | |||||
Protein_position | 35 | |||||
Exon_number | 2/3 | |||||
Codon_change | Caa/Gaa | |||||
Amino_acid_change | Q/E | |||||
Remark | [20081124 db] this Variation was previously named hw90606 | |||||
Method | WGS_Hawaiian_Waterston |