WormBase Tree Display for Sequence: F23D12
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| F23D12 | DNA | F23D12 | 40107 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (196) | ||||||
| Transcript | F23D12.t1 | 24430 | 24501 | |||
| F23D12.t2 | 24272 | 24201 | ||||
| F23D12.1.1 | 14480 | 11618 | ||||
| F23D12.11.1 | 11079 | 10199 | ||||
| F23D12.2.1 | 7907 | 2449 | ||||
| F23D12.3.1 | 28949 | 29778 | ||||
| F23D12.4.1 | 31329 | 32648 | ||||
| F23D12.5.1 | 34538 | 39895 | ||||
| F23D12.6.1 | 9733 | 10211 | ||||
| Pseudogene | F23D12.8 | 20540 | 21693 | |||
| F23D12.9 | 23079 | 23984 | ||||
| PCR_product (17) | ||||||
| Allele (882) | ||||||
| Oligo_set | Aff_F23D12.1 | 13168 | 10253 | |||
| Aff_F23D12.3 | 28961 | 29607 | ||||
| Aff_F23D12.4 | 31399 | 32452 | ||||
| Aff_F23D12.5 | 38437 | 39716 | ||||
| Feature_object (184) | ||||||
| Feature_data | F23D12:Polysome | 1 | 40107 | |||
| F23D12:TranscriptionallyActiveRegion | 1 | 40107 | ||||
| F23D12:ChIPSeqTF | 1 | 40107 | ||||
| F23D12:TRF | 1 | 40107 | ||||
| F23D12:Dust | 1 | 40107 | ||||
| F23D12:inverted | 1 | 40107 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | Y66C5A | 40008 | ||||
| Overlap_left | T14C1 | |||||
| Clone_right_end | T14C1 | 21433 | ||||
| DB_info | Database | EMBL | NDB_AC | Z71186 | ||
| NDB_SV | Z71186.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Barlow K | ||||
| From_laboratory | HX | |||||
| Date_directory | 960104 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F23D12 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 7bd6b3235c8faf7d71555cee97e2fded | ||||
| Status | Finished | 04 Jan 1996 00:00:00 | ||||
| Submitted | 18 Apr 1996 00:00:00 | |||||
| Annotated | 17 Apr 1996 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 7784 | ||
| Right | 7812 | |||||
| Interpolated_map_position | X | 16.704 | ||||
| Assembly_tags | Clone left end | 1 | 4 | F23D12 | ||
| annotation | 10785 | 10787 | these 3 bases lie in the loop of an inverted repeat, and we are unable to get clear data across them. So, CCC is our best guess going from the data we have. | |||
| 12898 | 12898 | single read has point mutation of T > G | ||||
| 24216 | 24334 | loop of inverted repeat, single read only with term here. | ||||
| 33924 | 33942 | 19 Cs seem clear, but data is not best over such areas | ||||
| Finished Left | 1 | 1 | F23D12 | |||
| Clone right end | 40104 | 40107 | F23D12 | |||
| 21429 | 21433 | T14C1 | ||||
| Finished Right | 40107 | 40107 | F23D12 | |||
| Method | Genomic_canonical |
