WormBase Tree Display for Gene: WBGene00001682
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WBGene00001682 | SMap | S_parent | Sequence | F08B6 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gpc | ||||||
Allele | WBVar00336868 | ||||||
WBVar00645701 | |||||||
WBVar00645702 | |||||||
WBVar00645703 | |||||||
WBVar01499786 | |||||||
WBVar01499054 | |||||||
WBVar00296739 | |||||||
WBVar01498959 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00011743 | ||||||
00011744 | |||||||
00011745 | |||||||
00104080 | |||||||
00104081 | |||||||
00104082 | |||||||
00104083 | |||||||
00104084 | |||||||
Ortholog (14) | |||||||
Paralog | WBGene00001681 | ||||||
Structured_description | Concise_description | gpc-2 encodes one of two C. elegans heterotrimeric G protein gamma subunits; gpc-2 is required, along with its partner GPB-1, a G protein beta subunit, for proper mitotic spindle positioning and orientation during early embryonic cell divisions; to date, GPC-2 expression has been reported in electrically excitable cells (all neurons and muscles). | Paper_evidence (2) | ||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable G-protein beta-subunit binding activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be part of heterotrimeric G-protein complex. Expressed in muscle cell and neurons. Is an ortholog of human GNG13 (G protein subunit gamma 13). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F08B6.2 | |||||
Corresponding_transcript | F08B6.2.1 | ||||||
Other_sequence (25) | |||||||
Associated_feature | WBsf643399 | ||||||
WBsf976750 | |||||||
WBsf983992 | |||||||
WBsf1009988 | |||||||
WBsf217884 | |||||||
Experimental_info | RNAi_result (18) | ||||||
Expr_pattern (7) | |||||||
Drives_construct | WBCnstr00001703 | ||||||
WBCnstr00012179 | |||||||
WBCnstr00036774 | |||||||
Construct_product | WBCnstr00013346 | ||||||
WBCnstr00036774 | |||||||
Microarray_results (22) | |||||||
Expression_cluster (185) | |||||||
Interaction (18) | |||||||
Map_info | Map | I | Position | 1.31097 | Error | 0.000909 | |
Positive | Positive_clone | F08B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00003465 | ||||||
WBPaper00004366 | |||||||
WBPaper00005423 | |||||||
WBPaper00006395 | |||||||
WBPaper00015719 | |||||||
WBPaper00017683 | |||||||
WBPaper00023171 | |||||||
WBPaper00024449 | |||||||
WBPaper00025141 | |||||||
WBPaper00029025 | |||||||
WBPaper00029109 | |||||||
WBPaper00032878 | |||||||
WBPaper00038491 | |||||||
WBPaper00040144 | |||||||
WBPaper00041169 | |||||||
WBPaper00047791 | |||||||
WBPaper00055090 | |||||||
WBPaper00055830 | |||||||
WBPaper00061459 | |||||||
WBPaper00064339 | |||||||
Remark | sdm changed subseq from e to 2 by inference of pfam match. 12/99 | ||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |