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WormBase Tree Display for Gene: WBGene00015061

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Name Class

WBGene00015061SMapS_parentSequenceB0228
IdentityVersion4
NameCGC_namecpna-2Person_evidenceWBPerson56
Sequence_nameB0228.4
Molecular_name (12)
Other_nametag-308
CELE_B0228.4Accession_evidenceNDBBX284602
Public_namecpna-2
DB_infoDatabaseAceViewgene2I41
WormQTLgeneWBGene00015061
WormFluxgeneWBGene00015061
NDBlocus_tagCELE_B0228.4
PanthergeneCAEEL|WormBase=WBGene00015061|UniProtKB=Q09221
familyPTHR45751
NCBIgene174250
RefSeqproteinNM_001026713.4
NM_063224.6
NM_063222.4
NM_001047258.3
SwissProtUniProtAccQ09221
TREEFAMTREEFAM_IDTF351315
UniProt_GCRPUniProtAccQ09221
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
222 Apr 2005 11:55:18WBPerson2970Name_changeCGC_nametag-308
321 Apr 2009 16:04:55WBPerson9133Name_changeCGC_namecpna-2
Other_nametag-308
410 Jun 2014 12:12:12WBPerson1983EventAcquires_mergeWBGene00043075
Acquires_mergeWBGene00015060
WBGene00043075
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpna
AlleleWBVar00146088Inferred_automaticallyFrom strain object: VC10072
WBVar00145834Inferred_automaticallyFrom strain object: VC876
WBVar00745867
WBVar00745868
WBVar00745869
WBVar00745870
WBVar01499702
WBVar00745871
WBVar00745872
WBVar00745873
WBVar00745874
WBVar00745875
WBVar00745876
WBVar02151984
WBVar00745877
WBVar00745878
WBVar01960106
WBVar00745879
WBVar00745880
WBVar00745881
WBVar00254323
WBVar00370713
WBVar00745882
WBVar00305192
WBVar00370714
WBVar00745883
WBVar00305193
WBVar00370715
WBVar00370716
WBVar01538291
WBVar00745884
WBVar00745885
WBVar01538292
WBVar00370717
WBVar00745886
WBVar01538293
WBVar00370718
WBVar00370719
WBVar00745887
WBVar00370720
WBVar00745888
WBVar00370721
WBVar00745889
WBVar00370722
WBVar00745890
WBVar00745891
WBVar00370723
WBVar01498435
WBVar00370724
WBVar00745892
WBVar00745893
WBVar00370725
WBVar00745894
WBVar00370726
WBVar00745895
WBVar00370727
WBVar00745896
WBVar00370728
WBVar00745897
WBVar00370729
WBVar02150325
WBVar00370730
WBVar00745898
WBVar00370731
WBVar00745899
WBVar01655358
WBVar00370732
WBVar00745900
WBVar00370733
WBVar00745901
WBVar00370734
WBVar00745902
WBVar00745903
WBVar02150331
WBVar00370735
WBVar00370736
WBVar00745904
WBVar00370737
WBVar00745905
WBVar00370738
WBVar00745906
WBVar00370739
WBVar00745907
WBVar00370740
WBVar00745908
WBVar00370741
WBVar00745909
WBVar00300839
WBVar01490724
WBVar00300840
WBVar01251306
WBVar00370742
WBVar00745910
WBVar00745911
WBVar00370743
WBVar00745912
WBVar00370744
WBVar00745913
WBVar01559617
WBVar00370745
WBVar00104575
WBVar00745914
WBVar00370746
WBVar01559618
WBVar00370747
WBVar00745915
WBVar00370748
WBVar00745916
WBVar00370749
WBVar01491836
WBVar00745917
WBVar00370750
WBVar00745918
WBVar00370751
WBVar00745919
WBVar00745920
WBVar00370752
WBVar00370753
WBVar00275617
WBVar00745921
WBVar00370754
WBVar00745922
WBVar00745923
WBVar00370755
WBVar00745924
WBVar00370756
WBVar00297076
WBVar00370757
WBVar00745925
WBVar00317297
WBVar00370758
WBVar00745926
WBVar00745927
WBVar00370759
WBVar00745929
WBVar00370760
WBVar00745930
WBVar00370761
WBVar00745931
WBVar00370762
WBVar00370763
WBVar02018068
WBVar00745932
WBVar00370764
WBVar00745933
WBVar00745934
WBVar00370765
WBVar00745935
WBVar00370766
WBVar00745936
WBVar00370767
WBVar01492222
WBVar00745937
WBVar00370768
WBVar01934999
WBVar00745938
WBVar00370769
WBVar00370770
WBVar00745939
WBVar01695626
WBVar00745940
WBVar00370771
WBVar00745941
WBVar01695627
WBVar00370772
WBVar00068099
WBVar01695628
WBVar00370773
WBVar00745942
WBVar01695629
WBVar00370774
WBVar00745943
WBVar00745944
WBVar00370775
WBVar01695630
WBVar00309756
WBVar00370776
WBVar00309757
WBVar01695631
WBVar00745945
WBVar00745946
WBVar01695632
WBVar00370777
WBVar01720354
WBVar00309758
WBVar00745947
WBVar01695633
WBVar00370778
WBVar01720355
WBVar01720356
WBVar00745948
WBVar00745949
WBVar00745950
WBVar00254943
WBVar00745951
WBVar00745952
WBVar00745953
WBVar00745954
WBVar00745955
WBVar00745956
WBVar00745957
WBVar00745958
WBVar01241699
WBVar00745959
WBVar00745960
WBVar01241700
WBVar01241701
WBVar02130276
WBVar00745961
WBVar00745962
WBVar02130277
WBVar00745963
WBVar02130278
WBVar01241711
WBVar02130279
WBVar00306365
WBVar00745964
WBVar01241714
WBVar00306367
WBVar00745965
WBVar01916789
WBVar00306368
WBVar01241719
WBVar00745966
WBVar00306370
WBVar00745967
WBVar01241720
WBVar00745968
WBVar00306371
WBVar00745969
WBVar00745970
WBVar00745971
WBVar00745972
WBVar01375800
WBVar00745973
WBVar01831280
WBVar00745974
WBVar00745975
WBVar00225920
WBVar00745976
WBVar00745977
WBVar00745978
WBVar00745979
WBVar00745980
WBVar00745981
WBVar00745982
WBVar00745983
WBVar00745984
WBVar00745985
WBVar00745986
WBVar00745987
WBVar00745988
WBVar00745989
WBVar01943393
WBVar01438551
WBVar00745990
WBVar01438552
WBVar02046995
WBVar01438553
WBVar00745991
WBVar00745992
WBVar01438554
WBVar00745993
WBVar01438556
WBVar00745994
WBVar01438557
WBVar00745810
WBVar00745995
WBVar01493385
WBVar00745996
WBVar00745811
WBVar00745997
WBVar00745812
WBVar00745813
WBVar00745998
WBVar00745814
WBVar00745999
WBVar00746000
WBVar00745815
WBVar00745816
WBVar00746001
WBVar00745817
WBVar00746002
WBVar00745818
WBVar00746003
WBVar00745819
WBVar00746004
WBVar00745820
WBVar00746005
WBVar00745821
WBVar00746006
WBVar00746007
WBVar00745822
WBVar00746008
WBVar00745823
WBVar00745824
WBVar00746009
WBVar00746010
WBVar00745825
WBVar00745826
WBVar00746011
WBVar02012119
WBVar00745827
WBVar00746012
WBVar00746013
WBVar00745828
WBVar00745829
WBVar00746014
WBVar00746015
WBVar00745830
WBVar00745831
WBVar00745832
WBVar00745833
WBVar00745834
WBVar00602363
WBVar00745835
WBVar00602365
WBVar00745836
WBVar00745837
WBVar00745838
WBVar00745839
WBVar00745840
WBVar00173580
WBVar00745841
WBVar00173581
WBVar00173582
WBVar00745842
WBVar00745843
WBVar00173583
WBVar00173584
WBVar01498940
WBVar00745844
WBVar00173585
WBVar00745845
WBVar00745846
WBVar00173586
WBVar01604193
WBVar01604194
WBVar00745847
WBVar00173587
WBVar00745848
WBVar01604195
WBVar00173588
WBVar00551527
WBVar00745849
WBVar00173589
WBVar01604196
WBVar00173590
WBVar00745850
WBVar01604197
WBVar00745851
WBVar00066694
WBVar00173591
WBVar00173592
WBVar00745852
WBVar00173593
WBVar00745853
WBVar00173594
WBVar01784058
WBVar00745854
WBVar00173595
WBVar00745855
WBVar00745856
WBVar00173596
WBVar00745857
WBVar00173597
WBVar00745858
WBVar01792206
WBVar00173598
WBVar00745859
WBVar01792207
WBVar00173599
WBVar00745860
WBVar00173600
WBVar00745861
WBVar00745862
WBVar00745863
WBVar00745864
WBVar00745865
WBVar00745866
WBVar01495097
StrainWBStrain00036140
WBStrain00037963
RNASeq_FPKM (74)
GO_annotation00050283
00050284
00050285
Ortholog (25)
ParalogWBGene00001577Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006441Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006495Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007044Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007221Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012128Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptioncpna-2 encodes proteins with similarity to several InterPro domains including those of polycystin cation channels, von Willebrand factor, the DNA recombination repair protein BRCA2, protein-tyrosine phosphatase, non-receptor type-13, glyoxylate carboligase, and copines, Ca2+-dependent phosphatidylserine binding proteins; cpna-2::gfp reporter fusions are expressed in body wall muscle.Paper_evidenceWBPaper00026677
Curator_confirmedWBPerson1843
Date_last_updated14 Dec 2009 00:00:00
Automated_descriptionPredicted to enable ubiquitin-protein transferase activity. Predicted to be involved in protein ubiquitination. Predicted to be located in nucleus. Expressed in body wall musculature; muscle cell; and pharyngeal muscle cell.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_info (5)
Experimental_infoRNAi_resultWBRNAi00038764Inferred_automaticallyRNAi_primary
WBRNAi00009607Inferred_automaticallyRNAi_primary
WBRNAi00038763Inferred_automaticallyRNAi_primary
WBRNAi00038762Inferred_automaticallyRNAi_primary
WBRNAi00009606Inferred_automaticallyRNAi_primary
WBRNAi00009605Inferred_automaticallyRNAi_primary
WBRNAi00001063Inferred_automaticallyRNAi_primary
Expr_patternChronogram1418
Expr89
Expr3676
Expr5023
Expr5024
Expr1024361
Expr1036435
Expr1142973
Expr2010498
Expr2028738
Drives_constructWBCnstr00002140
WBCnstr00004234
WBCnstr00011592
Microarray_results (50)
Expression_cluster (209)
InteractionWBInteraction000371459
WBInteraction000386094
WBInteraction000396907
WBInteraction000565486
WBInteraction000576746
WBInteraction000578440
WBInteraction000583916
WBInteraction000584201
Map_infoMapIIPosition0.55876Error0.003674
PositivePositive_cloneB0228Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5147
4221
4530
5562
Pseudo_map_position
ReferenceWBPaper00026677
WBPaper00039197
WBPaper00041771
WBPaper00055090
WBPaper00060839
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
[140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
MethodGene