WormBase Tree Display for Gene: WBGene00013567
expand all nodes | collapse all nodes | view schema
WBGene00013567 | SMap | S_parent | Sequence | Y75B12B | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y75B12B.1 | |||||||
Molecular_name (11) | |||||||||
Other_name | CELE_Y75B12B.1 | Accession_evidence | NDB | BX284605 | |||||
Public_name | Y75B12B.1 | ||||||||
DB_info | Database | AceView | gene | 5P663 | |||||
WormQTL | gene | WBGene00013567 | |||||||
WormFlux | gene | WBGene00013567 | |||||||
NDB | locus_tag | CELE_Y75B12B.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00013567|UniProtKB=C8TDI7 | |||||||
family | PTHR23015 | ||||||||
NCBI | gene | 190716 | |||||||
RefSeq | protein | NM_001269727.3 | |||||||
NM_001373163.2 | |||||||||
NM_001269726.2 | |||||||||
TrEMBL | UniProtAcc | Q9XWB8 | |||||||
C8TDI7 | |||||||||
H2KMK2 | |||||||||
UniProt_GCRP | UniProtAcc | C8TDI7 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:55 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01493075 | ||||||||
WBVar00478539 | |||||||||
WBVar01072190 | |||||||||
WBVar00478540 | |||||||||
WBVar01072191 | |||||||||
WBVar01072192 | |||||||||
WBVar00478541 | |||||||||
WBVar00478542 | |||||||||
WBVar01072193 | |||||||||
WBVar01072194 | |||||||||
WBVar00478543 | |||||||||
WBVar01828428 | |||||||||
WBVar00591322 | |||||||||
WBVar00591326 | |||||||||
WBVar01800235 | |||||||||
WBVar01463312 | |||||||||
WBVar00018955 | |||||||||
WBVar00018960 | |||||||||
WBVar00018965 | |||||||||
WBVar01744791 | |||||||||
WBVar01775751 | |||||||||
WBVar01500212 | |||||||||
WBVar01500213 | |||||||||
WBVar01499299 | |||||||||
WBVar01499316 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00078861 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
WBGene00084345 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
WBGene00065773 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
chrV_pilon.g16725 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (211) | |||||||||
Structured_description | Concise_description | Y75B12B.1 encodes a probable transposase, with many C. elegans paralogsand distant similarity to rotifer and insect transposases; Y75B12B.1 hasno known function in mass RNAi assays; Y75B12B.1 mRNA is stabilized bybound GLD-1. | Paper_evidence | WBPaper00006534 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 07 Apr 2007 00:00:00 | ||||||||
Automated_description | Enriched in germ line; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including puf-8; atfs-1; and hsp-6 based on microarray; tiling array; and RNA-seq studies. Is affected by eight chemicals including rotenone; manganese chloride; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Mos1 transposase, HTH domain and HTH domain in Mos1 transposase. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y75B12B.1a | |||||||
Y75B12B.1b | |||||||||
Y75B12B.1c | |||||||||
Corresponding_CDS_history | Y75B12B.1:wp156 | ||||||||
Corresponding_transcript | Y75B12B.1a.1 | ||||||||
Y75B12B.1a.2 | |||||||||
Y75B12B.1a.3 | |||||||||
Y75B12B.1b.1 | |||||||||
Y75B12B.1c.1 | |||||||||
Associated_feature | WBsf1002253 | ||||||||
WBsf1020991 | |||||||||
WBsf233008 | |||||||||
WBsf233009 | |||||||||
Experimental_info (8) | |||||||||
Map_info | Positive | Positive_clone | Y75B12B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 7.50751 | |||||||
Reference | WBPaper00006534 | ||||||||
Method | Gene |