WormBase Tree Display for Gene: WBGene00003658
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WBGene00003658 | SMap | S_parent | Sequence | H12C20 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | nhr-68 | Person_evidence | WBPerson600 | |||||
Sequence_name | H12C20.3 | ||||||||
Molecular_name | H12C20.3a | ||||||||
H12C20.3a.1 | |||||||||
CE18808 | |||||||||
H12C20.3b | |||||||||
CE47189 | |||||||||
H12C20.3b.1 | |||||||||
Other_name | CELE_H12C20.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | nhr-68 | ||||||||
DB_info | Database | AceView | gene | 5M55 | |||||
WormQTL | gene | WBGene00003658 | |||||||
WormFlux | gene | WBGene00003658 | |||||||
NDB | locus_tag | CELE_H12C20.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00003658|UniProtKB=Q9XXM8 | |||||||
family | PTHR24083 | ||||||||
NCBI | gene | 179589 | |||||||
RefSeq | protein | NM_001380769.3 | |||||||
NM_001380770.1 | |||||||||
SwissProt | UniProtAcc | Q9XXM8 | |||||||
TrEMBL | UniProtAcc | H8ESE6 | |||||||
UniProt_GCRP | UniProtAcc | Q9XXM8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:32 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
Allele | WBVar00146032 | Inferred_automatically | From strain object: VC1527 | ||||||
WBVar00146074 | Inferred_automatically | From strain object: VC1603 | |||||||
WBVar00470985 | |||||||||
WBVar01499337 | |||||||||
WBVar00470986 | |||||||||
WBVar01974847 | |||||||||
WBVar01499904 | |||||||||
WBVar01499905 | |||||||||
WBVar01499547 | |||||||||
WBVar02151651 | |||||||||
WBVar01866005 | |||||||||
WBVar01866006 | |||||||||
WBVar01049627 | |||||||||
WBVar01049628 | |||||||||
WBVar01049629 | |||||||||
WBVar01049630 | |||||||||
WBVar01049631 | |||||||||
WBVar01049632 | |||||||||
WBVar01049633 | |||||||||
WBVar01049634 | |||||||||
WBVar01049635 | |||||||||
WBVar01049636 | |||||||||
WBVar01049637 | |||||||||
WBVar01484716 | |||||||||
WBVar01049638 | |||||||||
WBVar01484717 | |||||||||
WBVar01049639 | |||||||||
WBVar01049640 | |||||||||
WBVar00257208 | |||||||||
WBVar01500208 | |||||||||
WBVar01500209 | |||||||||
WBVar01500212 | |||||||||
WBVar01500213 | |||||||||
WBVar01499299 | |||||||||
WBVar01499316 | |||||||||
WBVar01743576 | |||||||||
WBVar01743577 | |||||||||
Strain | WBStrain00036665 | ||||||||
WBStrain00036726 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (17) | |||||||||
Ortholog (26) | |||||||||
Paralog (216) | |||||||||
Structured_description | Automated_description | Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Part of chromatin. Expressed in head muscle and head neurons. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | H12C20.3a | |||||||
H12C20.3b | |||||||||
Corresponding_transcript | H12C20.3a.1 | ||||||||
H12C20.3b.1 | |||||||||
Other_sequence | FD514463.1 | ||||||||
FD515477.1 | |||||||||
FD514165.1 | |||||||||
CBC10258_1 | |||||||||
CSC00785_1 | |||||||||
Associated_feature | WBsf647277 | ||||||||
WBsf647278 | |||||||||
WBsf661751 | |||||||||
WBsf978297 | |||||||||
WBsf232522 | |||||||||
WBsf232523 | |||||||||
WBsf232524 | |||||||||
Transcription_factor | WBTranscriptionFactor000706 | ||||||||
Experimental_info | RNAi_result | WBRNAi00106876 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049367 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023509 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107494 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107599 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00065582 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033696 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016239 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107101 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107538 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00107415 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (12) | |||||||||
Drives_construct | WBCnstr00012742 | ||||||||
WBCnstr00015294 | |||||||||
WBCnstr00015295 | |||||||||
WBCnstr00015296 | |||||||||
WBCnstr00035965 | |||||||||
Construct_product | WBCnstr00035965 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (214) | |||||||||
Interaction (15) | |||||||||
Map_info (3) | |||||||||
Reference (17) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |