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WormBase Tree Display for Expression_cluster: WBPaper00037086:biotin_regulated

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Name Class

WBPaper00037086:biotin_regulatedDescriptionGenes with expression level affected by biotin deficiency. Genes were ranked by log2 (rank metric score) of their mean (n = 3 for each condition) differences between biotin sufficiency and deficiency. Statistical analysis included the t test comparing condition control to condition-deficient, false discovery rate calculation to control for multiple hypothesis testing and calculation of fold change (expressed as log2) value between the two conditions. Authors used these data to produce preordered ranked gene lists, which were then tested for enrichment by Gene Set Enrichment Analysis (GSEA v. 2.0, Broad Institute, Cambridge, Mass., USA). Genes included in this list were those belonging to the leading edge subset of GSEA. Also included are genes with expression level changed 2-fold or over with p <= 0.05.
SpeciesCaenorhabditis elegans
AlgorithmData are presented as the mean of 3 different experiments and statistical significance was evaluated by ANOVA at p < 0.05.
ReferenceWBPaper00037086
Based_on_WB_Release
GeneWBGene00013301Rank metric score: 0.9
WBGene00009740Rank metric score: 0.1
WBGene00009353Rank metric score: 0.4
WBGene00009218Rank metric score: 1.0
WBGene00006463Rank metric score: 1.3
WBGene00008506Rank metric score: 0.8
WBGene00016844Rank metric score: 1.4
WBGene00007880Rank metric score: 0.1
WBGene00004076
WBGene00007234Rank metric score: 1.6
WBGene00017759Rank metric score: 1.0
WBGene00006919Rank metric score: 0.1
WBGene00008667Rank metric score: 0.3
WBGene00016716Rank metric score: 2.8
WBGene00018151Rank metric score: 0.9
WBGene00022169Rank metric score: 0.2
WBGene00020696Rank metric score: 0.8
WBGene00017982Rank metric score: 0.5
WBGene00000209Rank metric score: 0.6
WBGene00021839Rank metric score: 0.1
WBGene00018269Rank metric score: 1.2
WBGene00020911Rank metric score: 1.1
WBGene00012094Rank metric score: 0.5
WBGene00009221Rank metric score: 3.7
WBGene00004198Rank metric score: 1.4
WBGene00001158Rank metric score: 3.9
WBGene00004192Rank metric score: 1.3
WBGene00006913
WBGene00012166Rank metric score: 0.4
WBGene00004193Rank metric score: 1.2
WBGene00004258Rank metric score: 0.5
WBGene00021849Rank metric score: 0.3
WBGene00003831Rank metric score: 0.1
WBGene00017781Rank metric score: 3.1
WBGene00004061Rank metric score: 1.8
WBGene00013406Rank metric score: 0.8
WBGene00001243Rank metric score: 1.6
WBGene00020757Rank metric score: 1.2
WBGene00000206Rank metric score: 1.1
WBGene00009051Rank metric score: 0.6
WBGene00020343Rank metric score: 2.2
WBGene00012983Rank metric score: 0.7
WBGene00004197Rank metric score: 1.1
WBGene00016392Rank metric score: 2.1
WBGene00016812Rank metric score: 0.7
WBGene00008414Rank metric score: 0.1
WBGene00007684Rank metric score: 0.2
WBGene00020185Rank metric score: 0.8
WBGene00006916Rank metric score: 0.9
WBGene00019060Rank metric score: 1.9
WBGene00009342Rank metric score: 0.2
WBGene00006918Rank metric score: 0.2
WBGene00012015Rank metric score: 1.1
WBGene00019295Rank metric score: 1.4
WBGene00018579Rank metric score: 3.3
WBGene00018491Rank metric score: 1.0
WBGene00010780Rank metric score: 0.4
WBGene00009006Rank metric score: 1.4
WBGene00018698Rank metric score: 1.3
WBGene00016995Rank metric score: 0.7
Rank metric score: 0.6
WBGene00008167Rank metric score: 2.7
WBGene00021043Rank metric score: 1.9
WBGene00007712Rank metric score: 1.2
WBGene00019644Rank metric score: 2.4
WBGene00003225Rank metric score: 0.2
WBGene00001157Rank metric score: 1.5
WBGene00001683Rank metric score: 1.6
WBGene00004959Rank metric score: 1
WBGene00001686Rank metric score: 1.9
WBGene00007108Rank metric score: 1.2
WBGene00002262Rank metric score: 1.1
WBGene00008780Rank metric score: 1.1
WBGene00019890Rank metric score: 1.1
WBGene00007150Rank metric score: 1.4
WBGene00000040Rank metric score: 1.1
WBGene00003162Rank metric score: 1.0
WBGene00010317Rank metric score: 0.8
WBGene00013237Rank metric score: 1.1
WBGene00018240Rank metric score: 0.8
WBGene00003061Rank metric score: 0.6
WBGene00011526Rank metric score: 0.6
WBGene00006921Rank metric score: 0.4
WBGene00013025Rank metric score: 0.2
WBGene00006433Rank metric score: 0.2
WBGene00009992Rank metric score: 0.2
WBGene00020636Rank metric score: 0.2
WBGene00013308Rank metric score: 0.1
WBGene00006917Rank metric score: 0.1
WBGene00015810Rank metric score: 0.1
WBGene00001399Rank metric score: 3.9
WBGene00001397Rank metric score: 1.3
WBGene00001244Rank metric score: 1.3
WBGene00001564Rank metric score: 2.0
WBGene00007016Rank metric score: 2.0
WBGene00010336Rank metric score: 1.7
WBGene00020258Rank metric score: 1.4
WBGene00004195Rank metric score: 1.2
WBGene00004194Rank metric score: 1.1
WBGene00018610Rank metric score: 1.1
WBGene00020812Rank metric score: 1.0
Attribute_ofMicroarray_experimentWBPaper00037086:elegans_sufficient_Biotin__1
WBPaper00037086:elegans_sufficient_Biotin__2
WBPaper00037086:elegans_biotin_deficiency__1
WBPaper00037086:elegans_biotin_deficiency__2
WBPaper00037086:elegans_biotin_deficiency__3
RegulationRegulated_by_moleculeWBMol:00004270
Associated_withLife_stageWBls:0000038