WormBase Tree Display for CDS: CBG14462a
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CBG14462a | SMap | S_parent | Sequence | cb25.fpc3857a | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 107 | ||
1676 | 1857 | ||||
1903 | 2044 | ||||
2520 | 2706 | ||||
2753 | 2875 | ||||
4386 | 4550 | ||||
4724 | 4842 | ||||
4897 | 4999 | ||||
DB_info | Database | UniProt | UniProtAcc | A8XK00 | |
UniProtId | A8XK00_CAEBR | ||||
Origin | From_laboratory | CB | |||
Species | Caenorhabditis briggsae | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Isoform | Curator_confirmed | WBPerson4025 | |||
Visible | Gene | WBGene00034946 | |||
Corresponding_transcript | CBG14462a.1 | ||||
Corresponding_protein | CBP47219 | ||||
Corresponding_oligo_set | GPL8303_CB6_WBGene00034946_A | ||||
GPL14143_CBG14462_126-185_0.780_20_B | |||||
GPL14143_CBG14462_181-240_0.741_58_C | |||||
GPL14143_CBG14462_358-417_0.801_8_A | |||||
Matching_cDNA | briggsae_GG470|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
Microarray_results | GPL8303_CB6_WBGene00034946_A | ||||
GPL14143_CBG14462_126-185_0.780_20_B | |||||
GPL14143_CBG14462_181-240_0.741_58_C | |||||
GPL14143_CBG14462_358-417_0.801_8_A | |||||
RNASeq_FPKM (9) | |||||
Last_reviewed | 31 Aug 2016 10:21:26 | WBPerson4025 | |||
Remark | [gffnote] orthologous to D1079.1 by best mutual match (eval=9e-49) ; Ortholog D1079.1 ; Supported_by_ortholog ; Supported_by_paralogs ; Supported_by_multiple_predictions ; Brigpep BP:CBP09657 ; Gene WBGene00034946 | ||||
[20080722 tb] Modified based on Jigsaw gene ContigchrX.briggsae.jigsaw.1614 | |||||
[160826 gw3] This CDS has been updated by using the Trinity model 'briggsae_GG470|c0_g1_i1-chrX-1'. | Curator_confirmed | WBPerson4025 | |||
Method | curated |