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C. elegans (BioProject PRJNA13758): 11.61 kbp from III:9,060,076..9,071,680

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Landmark or Region: Examples: IV, IV:20,000..40,000, lin-29, dpy-*, rhodopsin, B0019, PCR_product:sjjB0019.1.
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Alleles, Variations, RNAi

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Balancers [?]	High-throughput alleles [?]	RNAi experiments (secondary targets) [?]
Change-of-function alleles [?]	Million Mutation Project [?]	Transposon insert sites [?]
Change-of-function polymorphisms [?]	Polymorphisms	Variation PCR products [?]
Classical alleles [?]	RNAi experiments (primary targets) [?]

DNA

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3-frame translation (forward) [?]

3-frame translation (reverse) [?]

DNA/GC Content

Expression

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Expression chip profiles [?]	RNASeq [?]	SAGE tags [?]
Expression patterns [?]	RNASeq Asymmetries [?]
Polysomes [?]	RNASeq introns [?]

Genes

Ab-initio predictions

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Prediction: GeneFinder	Prediction: mGene	Prediction: mSplicer-ORF [?]
Prediction: GeneMarkHMM [?]	Prediction: mSplicer [?]	RNAz non-coding RNA genes [?]

Curated Genes

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Coding Segments [?]	Curated Genes (pseudogenes) [?]	Operons (deprecated) [?]
Curated Genes [?]	Gene Models (historical) [?]	Transposon Genes [?]
Curated Genes (noncoding) [?]	Genetic limits [?]	Transposons [?]
Curated Genes (protein-coding) [?]	Operons [?]

Supporting Evidence

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C. elegans OSTs [?]	mRNAs/ncRNAs (best) [?]	Transcriptionally Active Region [?]
C.elegans RSTs [?]	mRNAs/ncRNAs (other) [?]	Trinity-assembled RNAseq [?]
ESTs (best) [?]	ORFeome PCR Products [?]
ESTs (other) [?]	TEC-RED tags [?]

Genome Structure

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Segmental duplication [?]

Assembly & Curation

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Contig submissions [?]	Genome sequence corrections [?]	Links and Superlinks [?]
Genbank submissions [?]	Genome sequence errors [?]

Repeats

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Low complextity region (Dust) [?]

Repeat Region (RepeatMasker) [?]

Tandem and Inverted Repeats [?]

Misc

Transcription Start Sites

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TSS (Chen) Forward [?]	TSS (Kruesi) Forward [?]	TSS (Saito) Forward [?]
TSS (Chen) Reverse [?]	TSS (Kruesi) Reverse [?]	TSS (Saito) Reverse [?]

Reagents

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Microarray oligo probes [?]

PCR Assays [?]

YACs, Fosmids, & Cosmids [?]

Sequence Features

Binding Sites & Regions

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Binding regions [?]	Histone binding sites [?]	Transcription factor binding regions [?]
Binding sites (curated) [?]	Promoter regions [?]	Transcription factor binding sites [?]
Binding sites (predicted) [?]	Regulatory regions [?]

Signals & Motifs

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G4 Motif [?]	Trans-spliced acceptor [?]
PolyA sites and signal sequences [?]	Transcription end site [?]

Translated Features

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Mass spec peptides [?]

Protein motifs [?]

Sequence Similarity

Nucleotide

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IsoSeq matches (best) [?]	WormBase nematode mRNAs/ESTs (best) [?]
IsoSeq matches (other) [?]	WormBase nematode mRNAs/ESTs (other) [?]

Proteins

All on All off

B. malayi proteins [?]	C. remanei proteins [?]	P. pacificus proteins [?]
C. brenneri proteins [?]	D. melanogaster proteins [?]	S. cerevisiae proteins [?]
C. briggsae proteins [?]	H. sapiens proteins [?]	S. ratti proteins [?]
C. elegans proteins [?]	O. volvulus proteins [?]
C. japonica proteins [?]	Other UniProt proteins [?]

modENCODE Tracks

Henikoff Group

All on All off

Chromatin fractions extracted with NaCl [?] [showing 3/3 subtracks]

H3.3 Chromatin fractions extracted with NaCl [?] [showing 3/3 subtracks]

Mononucleosomes [?] [showing 2/2 subtracks]

Lieb Group

Centromere Specificaton and Kinetochore Function

All on All off

Centromere Specificaton ChIP-chip arrays [?] [showing 2/2 subtracks]

Chromosome-Nuclear Envelope Interaction

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Chromosome-Nuclear Envelope Interaction [?] [showing 2/2 subtracks]

Computed Peaks

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ChIP-chip computed peaks [?] [showing 8/8 subtracks]

Core Histones

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Core Histones ChIP-chip arrays [?] [showing 6/6 subtracks]

Dosage Compensation and Chromosome Organization

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Dosage Compensation ChIP-chip arrays [?] [showing 16/16 subtracks]

Mononucleosomes [?] [showing 2/2 subtracks]

Histone Modifications

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Histone Modifications ChIP-chip arrays [?] [showing 36/36 subtracks]

Histone Variants

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Histone Variants ChIP-chip arrays [?]

RNA Polymerase II Isoforms

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Polymerase II Isoforms ChIP-chip arrays [?] [showing 4/4 subtracks]

Transcription and Chromatin

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Transcription and Chromatin ChIP-chip arrays [?] [showing 6/6 subtracks]

Piano Group

3RACE polyA-capture 3-UTR 454 alignments

All on All off

Adult Hermaphrodite [?]	daf-7 Dauer [?]	L2 [?]
Adult Male [?]	daf-9 Dauer	L3 [?]
daf-11 Dauer [?]	Embryo [?]	L4 [?]
daf-2 Dauer [?]	L1 [?]

3RACE polyA-capture 3-UTR 454 sequencing pilot (alignments)

All on All off

Adult Hermaphroditte(3RACE pilot) [?]	L1(3RACE pilot) [?]	L3(3RACE pilot) [?]
Embryo(3RACE pilot) [?]	L2(3RACE pilot) [?]	L4(3RACE pilot) [?]

3UTR Annotation

All on All off

3prime UTRs - CEUP1 [?]	USTs - CEUP1 [?]	UTRome polyA sites [?]
polyA sites - CEUP1 [?]	UTRome 3prime UTRs [?]
RSTs - CEUP1 [?]	UTRome polyA signal sequence [?]

Mixed-stage 3RACE 3-UTR 454 sequencing (alignments)

All on All off

large RACE products -pool A [?]	large RACE products -pool G [?]	small RACE products -pool E [?]
large RACE products -pool B [?]	large RACE products -pool H [?]	small RACE products -pool F [?]
large RACE products -pool C [?]	small RACE products -pool A [?]	small RACE products -pool G [?]
large RACE products -pool D [?]	small RACE products -pool B [?]	small RACE products -pool H [?]
large RACE products -pool E [?]	small RACE products -pool C [?]	small RACE products -pool V1 [?]
large RACE products -pool F [?]	small RACE products -pool D [?]

Mixed-stage 3RACE 3-UTR Illumina sequencing (alignments)

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pool A [?]	pool D [?]	pool G [?]
pool C [?]	pool F [?]	pool H [?]

miRNAs 454 sequencing (alignments)

All on All off

eri-1 (mg366) [?]	glp-4 (bn2) [?]	N2 whole worms [?]
fer-1 unfertilized oocytes [?]	him-8 [?]

miRNAs Illumina sequencing (alignments)

All on All off

eri-1 (mg366) [?]	glp-4 (bn2) [?]	N2 embryos [?]
fer-1 unfertilized oocytes	him-8 [?]	N2 mixed stages [?]

Snyder Group

Pol II ChIP

Binding Sites

All on All off

Binding Sites AMA-1 (Pol II ChIP)	Binding Sites EOR-1 (Pol II ChIP)	PHA-4 (Pol II ChIP): Binding Sites [?] [showing 3/3 subtracks]
Binding Sites DAF-16 (Pol II ChIP)	Binding Sites HLH-8 (Pol II ChIP)	Pol II ChIP (N2): Binding Sites [?] [showing 7/7 subtracks]
Binding Sites EGL-5 (Pol II ChIP)	Binding Sites MAB-5 (Pol II ChIP)

Combined

All on All off

Combined AMA-1 (Pol II ChIP)	Combined EOR-1 (Pol II ChIP)	PHA-4 (Pol II ChIP): Combined [?] [showing 3/3 subtracks]
Combined DAF-16 (Pol II ChIP)	Combined HLH-8 (Pol II ChIP)	Pol II ChIP (N2): Combined [?] [showing 7/7 subtracks]
Combined EGL-5 (Pol II ChIP)	Combined MAB-5 (Pol II ChIP)

Replicates

All on All off

PHA-4 (Pol II ChIP): Replicates [?] [showing 6/6 subtracks]	Replicates DAF-16 (Pol II ChIP) [showing 2/2 subtracks]	Replicates HLH-8 (Pol II ChIP) [showing 2/2 subtracks]
Pol II ChIP (N2): Replicates [?] [showing 14/14 subtracks]	Replicates EGL-5 (Pol II ChIP) [showing 2/2 subtracks]	Replicates MAB-5 (Pol II ChIP) [showing 2/2 subtracks]
Replicates AMA-1 (Pol II ChIP) [showing 2/2 subtracks]	Replicates EOR-1 (Pol II ChIP) [showing 2/2 subtracks]

GFP ChIP

Binding Sites

All on All off

Binding Sites ALR-1 (GFP ChIP) [?]	Binding Sites EOR-1 (GFP ChIP) [?]	Binding Sites MEP-1 (GFP ChIP) [?]
Binding Sites AMA-1 (GFP ChIP) [?]	Binding Sites GEI-11 (GFP ChIP) [?]	Binding Sites NHR-105 (GFP ChIP) [?]
Binding Sites BLMP-1 (GFP ChIP) [?]	Binding Sites HLH-1 (GFP ChIP) [?]	Binding Sites NHR-6 (GFP ChIP) [?]
Binding Sites CEH-14 (GFP ChIP) [?]	Binding Sites HLH-8 (GFP ChIP) [?]	Binding Sites PES-1 (GFP ChIP) [?]
Binding Sites CEH-30 (GFP ChIP) [?]	Binding Sites LIN-11 (GFP ChIP) [?]	Binding Sites PQM-1 (GFP ChIP) [?]
Binding Sites DAF-16 (GFP ChIP) [?]	Binding Sites LIN-13 (GFP ChIP) [?]	Binding Sites SKN-1 (GFP ChIP) [?]
Binding Sites DPY-27 (GFP ChIP) [?]	Binding Sites LIN-15B (GFP ChIP) [?]	Binding Sites UNC-130 (GFP ChIP) [?]
Binding Sites EGL-27 (GFP ChIP) [?]	Binding Sites LIN-39 (GFP ChIP) [?]	PHA-4 (GFP ChIP): Binding Sites [?] [showing 6/6 subtracks]
Binding Sites EGL-5 (GFP ChIP) [?]	Binding Sites MAB-5 (GFP ChIP) [?]
Binding Sites ELT-3 (GFP ChIP) [?]	Binding Sites MDL-1 (GFP ChIP) [?]

Combined

All on All off

ALR-1 Combined (GFP ChIP) [?]	Combined EOR-1 (GFP ChIP) [?]	Combined MEP-1 (GFP ChIP)
Combined AMA-1 (GFP ChIP) [?]	Combined GEI-11 (GFP ChIP)	Combined NHR-105 (GFP ChIP)
Combined BLMP-1 (GFP ChIP)	Combined HLH-1 (GFP ChIP)	Combined NHR-6 (GFP ChIP)
Combined CEH-14 (GFP ChIP) [?]	Combined HLH-8 (GFP ChIP) [?]	Combined PES-1 (GFP ChIP)
Combined CEH-30 (GFP ChIP)	Combined LIN-11 (GFP ChIP) [?]	Combined PQM-1 (GFP ChIP)
Combined DAF-16 (GFP ChIP)	Combined LIN-13 (GFP ChIP)	Combined SKN-1 (GFP ChIP)
Combined DPY-27 (GFP ChIP) [?]	Combined LIN-15B (GFP ChIP)	Combined UNC-130 (GFP ChIP) [?]
Combined EGL-27 (GFP ChIP)	Combined LIN-39 (GFP ChIP)	PHA-4 (GFP ChIP): Combined [?] [showing 6/6 subtracks]
Combined EGL-5 (GFP ChIP)	Combined MAB-5 (GFP ChIP)
Combined ELT-3 (GFP ChIP)	Combined MDL-1 (GFP ChIP)

Replicates

All on All off

PHA-4 (GFP ChIP): Replicates [?] [showing 12/12 subtracks]	Replicates ELT-3 (GFP ChIP) [showing 2/2 subtracks]	Replicates MDL-1 (GFP ChIP) [showing 2/2 subtracks]
Replicates ALR-1 (GFP ChIP) [showing 2/2 subtracks]	Replicates EOR-1 (GFP ChIP) [showing 2/2 subtracks]	Replicates MEP-1 (GFP ChIP) [showing 2/2 subtracks]
Replicates AMA-1 (GFP ChIP) [showing 2/2 subtracks]	Replicates GEI-11 (GFP ChIP) [showing 2/2 subtracks]	Replicates NHR-105 (GFP ChIP) [showing 2/2 subtracks]
Replicates BLMP-1 (GFP ChIP) [showing 2/2 subtracks]	Replicates HLH-1 (GFP ChIP) [showing 2/2 subtracks]	Replicates NHR-6 (GFP ChIP) [showing 2/2 subtracks]
Replicates CEH-14 (GFP ChIP) [showing 2/2 subtracks]	Replicates HLH-8 (GFP ChIP) [showing 2/2 subtracks]	Replicates PES-1 (GFP ChIP) [showing 2/2 subtracks]
Replicates CEH-30 (GFP ChIP) [showing 2/2 subtracks]	Replicates LIN-11 (GFP ChIP) [showing 2/2 subtracks]	Replicates PQM-1 (GFP ChIP) [showing 2/2 subtracks]
Replicates DAF-16 (GFP ChIP) [showing 2/2 subtracks]	Replicates LIN-13 (GFP ChIP) [showing 2/2 subtracks]	Replicates SKN-1 (GFP ChIP) [showing 2/2 subtracks]
Replicates DPY-27 (GFP ChIP) [showing 2/2 subtracks]	Replicates LIN-15B (GFP ChIP) [showing 2/2 subtracks]	Replicates UNC-130 (GFP ChIP) [showing 2/2 subtracks]
Replicates EGL-27 (GFP ChIP) [showing 2/2 subtracks]	Replicates LIN-39 (GFP ChIP) [showing 2/2 subtracks]
Replicates EGL-5 (GFP ChIP) [showing 2/2 subtracks]	Replicates MAB-5 (GFP ChIP) [showing 2/2 subtracks]

modENCODE data (2014)

Chromatin Structure

Chromatin Modifying Enzymes

All on All off

Centromere Specificaton ChIP-chip arrays [?] [showing 8/8 subtracks]

Chromatin Silencing ChIP-chip arrays [?] [showing 3/3 subtracks]

Chromosome-Nuclear Envelope Interaction [?] [showing 6/6 subtracks]

Histone Modifications and Variants

All on All off

Core Histones ChIP-chip arrays [?] [showing 7/7 subtracks]	Histone Modifications (H3K79) ChIP-chip arrays [?] [showing 9/9 subtracks]	Histone Modifications in H3K23 (ChIP-Seq) [?]
Core Histones ChIP-Seq [?]	Histone Modifications (H3K79) ChIP-Seq [?] [showing 2/2 subtracks]	Histone Modifications in H3K27 (ChIP-Seq) [?] [showing 5/5 subtracks]
Histone Modifications (H3K18) ChIP-Seq [?]	Histone Modifications (H3K9) ChIP-chip arrays [?] [showing 11/11 subtracks]	Histone Modifications in H3K36 (ChIP-Seq) [?] [showing 5/5 subtracks]
Histone Modifications (H3K23) ChIP-Seq [?]	Histone Modifications (H3K9) ChIP-Seq [?] [showing 4/4 subtracks]	Histone Modifications in H3K4 (ChIP-Seq) [?] [showing 6/6 subtracks]
Histone Modifications (H3K27) ChIP-chip arrays [?] [showing 9/9 subtracks]	Histone Modifications (H4) ChIP-chip arrays [?] [showing 9/9 subtracks]	Histone Modifications in H3K79 (ChIP-Seq) [?] [showing 4/4 subtracks]
Histone Modifications (H3K27) ChIP-Seq [?] [showing 4/4 subtracks]	Histone Modifications (H4) ChIP-Seq [?]	Histone Modifications in H3K9 (ChIP-Seq) [?] [showing 9/9 subtracks]
Histone Modifications (H3K36) ChIP-chip arrays [?] [showing 17/17 subtracks]	Histone Modifications (H4K20) ChIP-Seq	Histone Modifications in H3Ser10 [?]
Histone Modifications (H3K36) ChIP-Seq [?] [showing 4/4 subtracks]	Histone Modifications in H2AK5 (ChIP-Seq) [?] [showing 2/2 subtracks]	Histone Modifications in H4K20 (ChIP-Seq) [?] [showing 3/3 subtracks]
Histone Modifications (H3K4) ChIP-chip arrays [?] [showing 14/14 subtracks]	Histone Modifications in H3K14 (ChIP-Seq) [?]	Histone Modifications in H4K8 (ChIP-Seq) [?] [showing 3/3 subtracks]
Histone Modifications (H3K4) ChIP-Seq [?] [showing 3/3 subtracks]	Histone Modifications in H3K18 (ChIP-Seq) [?]	Histone Variants ChIP-chip arrays [?]

Nucleosome Structure

All on All off

Chromatin fractions extracted with NaCl [?] [showing 3/3 subtracks]	Mononucleosomes [?] [showing 3/3 subtracks]
H3.3 Chromatin fractions extracted with NaCl [?] [showing 3/3 subtracks]	Mononucleosomes 80mM NaCl [?] [showing 2/2 subtracks]

Transcription Factors

Control N2 ChIP

All on All off

Pol II Combined (N2 ChIP) [?] [showing 7/7 subtracks]

GFP ChIP

All on All off

AHA-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	FKH-2 Combined (GFP ChIP) [?]	NHR-25 Combined (GFP ChIP) [?]
ALR-1 Combined (GFP ChIP) [?]	FOS-1 Combined (GFP ChIP) [?] [showing 4/4 subtracks]	NHR-28 Combined (GFP ChIP) [?] [showing 4/4 subtracks]
ALY-2 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	GEI-11 Combined (GFP ChIP) [?] [showing 6/6 subtracks]	NHR-6 Combined (GFP ChIP) [?]
AMA-1 Combined (GFP ChIP) [?]	HAM-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NHR-6.v2 Combined (GFP ChIP) [?]
BLMP-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	HLH-1 Combined (GFP ChIP) [?]	NHR-67 Combined (GFP ChIP) [?]
C01B12.2 Combined (GFP ChIP) [?]	HLH-30 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NHR-76 Combined (GFP ChIP) [?] [showing 2/2 subtracks]
C16A3.4 Combined (GFP ChIP) [?]	HPL-2 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	NHR-77 Combined (GFP ChIP) [?] [showing 4/4 subtracks]
C34F6.9 Combined (GFP ChIP) [?]	JUN-1 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	PAX-1 Combined (GFP ChIP) [?]
CEH-14 Combined (GFP ChIP) [?]	LIN-11 Combined (GFP ChIP) [?]	PEB-1 Combined (GFP ChIP) [?]
CEH-16 Combined (GFP ChIP) [?]	LIN-13 Combined (GFP ChIP) [?] [showing 4/4 subtracks]	PES-1 Combined (GFP ChIP) [?]
CEH-26 Combined (GFP ChIP) [?]	LIN-15B Combined (GFP ChIP) [?] [showing 3/3 subtracks]	PHA-4 Combined (GFP ChIP) [?] [showing 8/8 subtracks]
CEH-28 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	LIN-35 Combined (GFP ChIP) [?] [showing 5/5 subtracks]	PQM-1 Combined (GFP ChIP) [?]
CEH-30 Combined (GFP ChIP) [?]	LIN-39 Combined (GFP ChIP) [?] [showing 4/4 subtracks]	R02D3.7 Combined (GFP ChIP) [?] [showing 3/3 subtracks]
CEH-39 Combined (GFP ChIP) [?]	LSY-2 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	SEA-2 Combined (GFP ChIP) [?]
CES-1 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	MAB-5 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	SEM-4 Combined (GFP ChIP) [?]
DAF-12 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	MDL-1 Combined (GFP ChIP) [?]	SKN-1 Combined (GFP ChIP) [?] [showing 4/4 subtracks]
DAF-16 Combined (GFP ChIP) [?]	MED-1 Combined (GFP ChIP) [?]	SMA-9 Combined (GFP ChIP) [?]
DPL-1 Combined (GFP ChIP) [?] [showing 4/4 subtracks]	MEF-2 Combined (GFP ChIP) [?]	SPTF-1 Combined (GFP ChIP) [?]
DPY-27 Combined (GFP ChIP) [?]	MEP-1 Combined (GFP ChIP) [?]	TLP-1 Combined (GFP ChIP) [?]
DVE-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	MML-1 Combined (GFP ChIP) [?]	UNC-130 Combined (GFP ChIP) [?]
EFL-1 Combined (GFP ChIP) [?] [showing 4/4 subtracks]	N2_POLIII_YA Combined (GFP ChIP) [?]	UNC-39 Combined (GFP ChIP) [?] [showing 2/2 subtracks]
EGL-27 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NFYA-1 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	UNC-55 Combined (GFP ChIP) [?]
EGL-5 Combined (GFP ChIP) [?]	NHR-10 Combined (GFP ChIP) [?]	UNC-62 Combined (GFP ChIP) [?] [showing 6/6 subtracks]
ELT-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NHR-11 Combined (GFP ChIP) [?] [showing 5/5 subtracks]	W03F9.2 Combined (GFP ChIP) [?]
ELT-3 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	NHR-116 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	ZAG-1 Combined (GFP ChIP) [?] [showing 4/4 subtracks]
EOR-1 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NHR-12 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	ZIP-2 Combined (GFP ChIP) [?]
F16B12.6 Combined (GFP ChIP) [?]	NHR-129 Combined (GFP ChIP) [?]	ZK377.2 Combined (GFP ChIP) [?] [showing 4/4 subtracks]
F23B12.7 Combined (GFP ChIP) [?]	NHR-2 Combined (GFP ChIP) [?]	ZTF-11 Combined (GFP ChIP) [?] [showing 3/3 subtracks]
F23F12.9 Combined (GFP ChIP) [?]	NHR-21 Combined (GFP ChIP) [?]	ZTF-4 Combined (GFP ChIP) [?] [showing 3/3 subtracks]
F45C12.2 Combined (GFP ChIP) [?] [showing 3/3 subtracks]	NHR-23 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	ZTF-7 Combined (GFP ChIP) [?]
FKH-10 Combined (GFP ChIP) [?] [showing 2/2 subtracks]	NHR-237 Combined (GFP ChIP) [?] [showing 4/4 subtracks]

GFP ChIP (Peak Recall)

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ALR-1 Combined (GFP ChIP) recalled peaks [?]	GEI-11 Combined (GFP ChIP) recalled peaks [?]	MEP-1 Combined (GFP ChIP) recalled peaks [?]
BLMP-1 Combined (GFP ChIP) recalled peaks [?]	HLH-1 Combined (GFP ChIP) recalled peaks [?]	PES-1 Combined (GFP ChIP) recalled peaks [?]
CEH-14 Combined (GFP ChIP) recalled peaks [?]	LIN-11 Combined (GFP ChIP) recalled peaks [?]	PHA-4 Combined (GFP ChIP) recalled peaks [?] [showing 6/6 subtracks]
CEH-30 Combined (GFP ChIP) recalled peaks [?]	LIN-13 Combined (GFP ChIP) recalled peaks [?]	PQM-1 Combined (GFP ChIP) recalled peaks [?]
DPY-27 Combined (GFP ChIP) recalled peaks [?]	LIN-15B Combined (GFP ChIP) recalled peaks [?]	SKN-1 Combined (GFP ChIP) recalled peaks [?]
EGL-27 Combined (GFP ChIP) recalled peaks [?]	LIN-39 Combined (GFP ChIP) recalled peaks [?]	UNC-130 Combined (GFP ChIP) recalled peaks [?]
EGL-5 Combined (GFP ChIP) recalled peaks [?]	MAB-5 Combined (GFP ChIP) recalled peaks [?]
EOR-1 Combined (GFP ChIP) recalled peaks [?]	MDL-1 Combined (GFP ChIP) recalled peaks [?]

PolII ChIP

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AMA-1 Combined (Pol II ChIP) [?]	EOR-1 Combined (Pol II ChIP) [?]	PHA-4 Combined (Pol II ChIP) [?] [showing 3/3 subtracks]
DAF-16 Combined (Pol II ChIP) [?]	HLH-8 Combined (Pol II ChIP) [?]
EGL-5 Combined (Pol II ChIP) [?]	MAB-5 Combined (Pol II ChIP) [?]

PolII Isoforms ChIP

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Polymerase II Isoforms ChIP-chip arrays [?] [showing 7/7 subtracks]

Transcription and Chromatin

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CBP-1 ChIP-chip arrays [?]	MRG-1 ChIP-chip arrays [?]	Transcription Factors ChIP-Seq L3 [?] [showing 19/19 subtracks]
Dosage Compensation ChIP-chip arrays [?] [showing 17/17 subtracks]	No Antibody (IGG) ChIP-chip arrays [?] [showing 2/2 subtracks]	Transcription Factors ChIP-Seq Late Embryo [?] [showing 9/9 subtracks]
Dosage Compensation ChIP-Seq [?]	Polycomb Proteins ChIP-Seq [?]	Transcription Factors ChIP-Seq Mixed embryo [?] [showing 24/24 subtracks]
Lin-15B ChIP-chip arrays [?]	Transcription Factors ChIP-Seq DH245 [?] [showing 31/31 subtracks]	ZFP-1 ChIP-chip arrays [?] [showing 3/3 subtracks]
MES-4 ChIP-chip arrays [?] [showing 3/3 subtracks]	Transcription Factors ChIP-Seq Early Embryo [?] [showing 4/4 subtracks]

Overview

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Landmarks

Analysis

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Restriction Sites

Snapshots

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