- WBPmat00005486
Motif A from rex sites, as defined in WBPaper00028816/pmid17122774.
- WBPmat00005487
Motif B from rex sites, as defined in WBPaper00028816/pmid17122774.
- WBPmat00005517
Motif number 1-8 predicted by Mortazavi et al. (2010); previously found by Elemento and Tavazoie (2005) as highly significant motif (4th out of 375).
- WBPmat00000048
P1a, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; weight matrix.
- WBPmat00000038
P1b, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; frequency matrix.
- WBPmat00005527
Motif number 2-18 predicted by Mortazavi et al. (2010); previously found by Elemento and Tavazoie (2005) as a motif with 140th significance out of 375.
- WBPmat00000037
P1a, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; frequency matrix.
- WBPmat00000049
P1b, found in PHA-4-regulated pharyngeal genes; predicted to act as a weak, variable enhancer in pharyngeal cells after the pharynx primordium forms; weight matrix.
- WBPmat00000065
Class III PUF-11-binding RNA site. The AU dinucleotide was located in position +7 and +8. An adenosine was highly preferred in position +5, as in Class I.
- WBPmat00005525
Motif number 1-19 predicted by Mortazavi et al. (2010); previously found by Elemento and Tavazoie (2005) as two overlapping motifs with 26th and 31st significance out of 375.