r661 is an allele of
unc-54 generated by imprecise excision of Tc1 from its 'hotspot' of insertion within the gene.
unc-54(
r661) homozygotes are very slow, have low brood sizes, and contain only about 20% of the wild-type amount of myosin heavy chain B. The DNA sequences of
r661 and other imprecise excisions from the hotspot suggest that the defect in
r661 is due to altered mRNA splicing. The insertional hotspot is immediately adjacent to the 5' splice site of IVS-3. Imprecise excision yields mutations in and around this splice site, and we believe that
r661 owes its phenotype to an insufficient amount of properly spliced mRNA.
r661 contains two closely spaced 5' splice sites which may compete with each other for splicing; only one of these sites yields functional mRNA [Eide and Anderson WBG 2:40; MCB 8:737-748 (1988)]. We have isolated two, unlinked, recessive suppressors of
unc-54(
r661) following EMS mutagenesis. Both suppressors, designated here as Sup(
r662) and Sup
(r663), improve the motility of
unc-54(
r661), but the suppressed animals are not wild-type. Neither suppressor shows a distinct phenotype other than suppression of
unc-54(
r661).
unc-54(
r661) accumulates approximately 5-8 fold less
unc-54 mRNA than wild-type. The transcript is normal in size, indicating that unspliced (IVS-3 containing) mRNA does not accumulate in these animals.
unc-54(
r661); Sup
(r662) and
unc-54(
r661);Sup
(r663) strains accumulate 2-3 fold more
unc-54 mRNA than
unc-54(
r661) alone. Therefore, these suppressors may improve the motility of
unc-54(
r661) by increasing the steady state level of
unc-54 message. We do not know yet whether this increase in message level occurs by altering the specificity of splicing, the efficiency of splicing, or by some other mechanism. We will use primer extension sequencing to identify the spliced products of
unc-54(
r661) and its suppressors.
unc-54(
r661);Sup
(r662) hermaphrodites have a low-penetrance, protruding vulva (p-vul) phenotype. This suggested that Sup
(r662) might be related to the 'morpho-mab' class of suppressors (
mab-1, 11, 13, 14, 15, 16), which also have a p-vul phenotype. Such suppressors suppress specific alleles ofseveral genes, including
unc-54(
r293), 09), and
lin-29(
n546) [J. Hodgkin, WBG 10(1):112 ( 1987); J. Hodgkin et. al, this issue]. We tested the ability of Sup(
r662) and Sup
(r663) to suppress
unc-54(
r293). Neither suppressor suppressed
unc-54(
r293). Furthermore, none of the Mabs listed above suppressed
unc-54(
r661). Therefore, Sup
(r662) and Sup
(r663) are distinct from the 'morpho-mab' class of suppressors.