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[
WormBook,
2006]
Early cell lineages and arrangement of blastomeres in C. elegans are similar to the pattern found in Ascaris and other studied nematodes leading to the assumption that embryonic development shows little variation within the phylum Nematoda. However, analysis of a larger variety of species from various branches of the phylogenetic tree demonstrate that prominent variations in crucial steps of early embryogenesis exist among representatives of this taxon. So far, most of these variations have only been studied on a descriptive level and thus essentially nothing is known about their molecular or genetic basis. Nevertheless, it is obvious that the limited morphological diversity of the freshly hatched juvenile and the uniformity of the basic body plan contrast with the many modifications in the way a worm is generated from the egg cell. This chapter focuses on the initial phase between egg activation and gastrulation and deals with the following aspects: reproduction and diploidy, polarity, cleavage and germ line, cell lineages; cell cycles and maternal contribution, cell-cell communication and cell specification, gastrulation.
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[
Curr Biol,
1994]
Comparisons between the cell lineages of different nematode species reveal the flexibility of developmental programs over evolutionary time.
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[
WormBook,
2005]
C. elegans presents a low level of molecular diversity, which may be explained by its selfing mode of reproduction. Recent work on the genetic structure of natural populations of C. elegans indeed suggests a low level of outcrossing, and little geographic differentiation because of migration. The level and pattern of molecular diversity among wild isolates of C. elegans are compared with those found after accumulation of spontaneous mutations in the laboratory. The last part of the chapter reviews phenotypic differences among wild isolates of C. elegans.
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[
Trends Genet,
2001]
Large-scale sequencing efforts are providing new perspectives on similarities and differences among species. Sequences encoding nuclear receptor (NR) transcription factors furnish one striking example of this. The three complete or nearly complete metazoan genome sequences - those of the nematode Caenorhabditis elegans, the fruit fly (Drosophila melanogaster) and the human - reveal dramatically different numbers of predicted NR genes: 270 for the nematode, 21 for the fruit fly and similar to 50 for the human. Although some classes of NRs present in insects and mammals are also represented among the nematode genes, most of the C. elegans NR sequences are distinct from those known in other phyla. Questions regarding the evolution and function of NR genes in nematodes, framed by the abundance and diversity of these genes in the C. elegans genome, are the focus of this article.
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[
Med Sci (Paris),
2009]
Interindividual variation, be it of environmental or genetic origin, is crucial for biological evolution as well as in the medical context. This variation is not always directly visible, yet may be revealed under some environmental or genetic condition. In this essay is presented the example of the developmental model system underlying vulva formation in the nematode Caenorhabditis elegans, where an intercellular signaling network (EGF-Ras-MAP kinase, Notch and Wnt pathways) is involved in spatial patterning of the fates of the vulva precursor cells. Variation may be studied at two levels: (1) rare deviations in the system's output, i.e. the spatial pattern of vulva precursor cell fates ; (2) so-called << cryptic >> variation in the underlying intercellular signaling network, without change in the system's output. Like every biological system, this network displays genetic and -environmental epistasis.
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[
Int J Parasitol,
1994]
An absolute pre-requisite for a genetic response to a selective pressure is genetic variation within the population under selection. Helminth populations are clearly able to respond to selective pressures and must, therefore, be genetically heterogeneous. While not quite tautological, this is at best indirect evidence for the existence of genetic variation but there are few examples of well documented helminth phenotypic variation with a proven genetic basis. Isozyme analysis has provided more direct evidence for variation but attempts to link this variation to responses to selection or to identify the forces maintaining that variation have been largely unsuccessful. Thus there is a clear need for new techniques. The recent application of PCR and direct sequencing technology to the study of helminth genetics has allowed the genotypes of individual worms to be determined and the first direct measurements of allele frequencies to be made in this group of organisms. In addition, the application of genetic and molecular data from Caenorhabditis elegans is a potentially rich source of new markers. These techniques do not require that the genetic basis of the phenotype in question be known since a large number of loci can be examined and selection detected through changes in the frequency of anonymous linked marker loci. Phenotypes with complex genetic bases can, therefore, be analysed. I have applied these techniques to the study of anthelmintic resistance genetics and others have applied them to the genetics of inhibited development in Ostertagia. Other phenotypes that are of great interest are the potential for selection of resistance to vaccination and the use of genetically resistant hosts. The ease with which helminths have countered all classes of anthelminitics and the apparently high levels of polymorphism in helminth populations suggest that immunological control methods may also prove to be vulnerable to the adaptive capabilities of the parasite. Evidence from a mouse-helminth model system has already provided evidence that worms can meet the challenge.
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[
Neuron,
1998]
The question of how genes contribute to normal individual differences in behavior has captured our imagination for more than a century. Several fundamental questions come to mind. How do genes and their proteins act in the nervous system and in response to the environment in order to cause individual differences in behavior? Do genetic differences between natural variants arise from alterations in the structural or regulatory region of a gene? Can we predict which genes for behavior, identified by mutant analysis in the laboratory, will have natural allelic variation? Three groundbreaking studies (Osborne et al., 1997; Sawyer et al., 1997; de Bono and Bargmann, 1998) published in the past year demonstrate that we now have the knowledge and technological capability to address these questions empirically. Each study has successfully identified a single major gene for a given behavior and, with the aid of transgenic animals, shown that its gene product is responsible for naturally occurring individual differences
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[
Sci STKE,
2006]
Shockingly few transcription factors and cell signaling pathways are utilized to pattern organs and to specify the fate of a seemingly endless variety of unique cell types during animal development. This dichotomy led to the hypothesis that each factor is used in multiple tissues and that a combinatorial code of factors determines cell fate or tissue identity in a unique fashion. Two recent papers describe temporal changes in the interplay between Hox transcription factors, which specify positional identity, and Wnt signaling, which provides spatial information and promotes asymmetric cell division. These changes guide cells through a series of discrete steps, leading to unique fates. Variations between these two studies highlight the diversifying potential of combinatorial regulation, in short, that the pathways through which these molecules interact can vary even between adjacent cells. Shared features include cross-regulatory interactions to redeploy patterning genes in a tissue-specific manner for organogenesis and coregulation of common downstream targets. Identification of additional combinatorial gene targets and elucidation of their underlying molecular mechanisms are important future tasks in developmental biology and the study of evolution.
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[
Microorganisms,
2020]
The bacterivorous nematode <i>Caenorhabditis elegans</i> is an important model species for understanding genetic variation of complex traits. So far, most studies involve axenic laboratory settings using <i>Escherichia coli</i> as the sole bacterial species. Over the past decade, however, investigations into the genetic variation of responses to pathogenic microbiota have increasingly received attention. Quantitative genetic analyses have revealed detailed insight into loci, genetic variants, and pathways in <i>C. elegans</i> underlying interactions with bacteria, microsporidia, and viruses. As various quantitative genetic platforms and resources like <i>C. elegans</i> Natural Diversity Resource (CeNDR) and Worm Quantitative Trait Loci (WormQTL) have been developed, we anticipate that expanding <i>C. elegans</i> research along the lines of genetic variation will be a treasure trove for opening up new insights into genetic pathways and gene functionality of microbiota interactions.
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[
Exp Gerontol,
2006]
Aging is generally defined and studied as a population phenomenon. However, there is great interest, especially when discussing human aging, in the identification of factors that influence the life span of an individual organism. The nematode Caenorhabditis elegans provides an excellent model system for the study of aging at the level of the individual, since young nematodes are essentially clonal yet experience a large range of individual life spans. We are conducting gene expression profiling of individual nematodes, with the aim of discovering genes that vary stochastically in expression between individuals of the same age. Such genes are candidates to modulate the ultimate life span achieved by each individual. We here present statistical analysis of gene expression profiles of individual nematodes from two different microarray platforms, examining the issue of technical vs. biological variance as it pertains to uncovering genes of interest in this paradigm of individual aging.